dbCAN HGM

Cluster: ChuDM_2017_SRR8942396_bin.6_CGC4

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	ChuDM_2017_SRR8942396_bin.6_k119_7566	ChuDM_2017_SRR8942396_bin.6_k119_7566_109	115360	115752	-	1.A.43.1.13
TC	ChuDM_2017_SRR8942396_bin.6_k119_7566	ChuDM_2017_SRR8942396_bin.6_k119_7566_110	115912	117567	+	2.A.17.1.6
CAZyme	ChuDM_2017_SRR8942396_bin.6_k119_7566	ChuDM_2017_SRR8942396_bin.6_k119_7566_111	117630	118427	+	GT25
pfam	ChuDM_2017_SRR8942396_bin.6_k119_7566	ChuDM_2017_SRR8942396_bin.6_k119_7566_112	118692	120851	+	GTP_EFTU \| EFG_C \| GTP_EFTU_D2 \| EFG_IV \| EFG_IV \| EFG_III \| EF-G_D2
pfam	ChuDM_2017_SRR8942396_bin.6_k119_7566	ChuDM_2017_SRR8942396_bin.6_k119_7566_113	120911	121735	-	ROK
CAZyme	ChuDM_2017_SRR8942396_bin.6_k119_7566	ChuDM_2017_SRR8942396_bin.6_k119_7566_114	121771	122976	-	GH154

Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_7566_109
Type: TC
Location: 115360 - 115752 (-)

Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_7566_110
Type: TC
Location: 115912 - 117567 (+)

Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_7566_111
Type: CAZyme
Location: 117630 - 118427 (+)

Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_7566_112
Type: pfam
Location: 118692 - 120851 (+)

Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_7566_113
Type: pfam
Location: 120911 - 121735 (-)

Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_7566_114
Type: CAZyme
Location: 121771 - 122976 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.