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Cluster: ChuDM_2017_SRR8942396_bin.6_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ChuDM_2017_SRR8942396_bin.6_k119_25218 ChuDM_2017_SRR8942396_bin.6_k119_25218_6 3117 3917 + 9.B.196.1.2
CAZyme ChuDM_2017_SRR8942396_bin.6_k119_25218 ChuDM_2017_SRR8942396_bin.6_k119_25218_7 3931 4659 + GT2
CAZyme ChuDM_2017_SRR8942396_bin.6_k119_25218 ChuDM_2017_SRR8942396_bin.6_k119_25218_8 4659 6353 + GT83
TC ChuDM_2017_SRR8942396_bin.6_k119_25218 ChuDM_2017_SRR8942396_bin.6_k119_25218_9 6356 7003 + 2.A.123.4.1
pfam ChuDM_2017_SRR8942396_bin.6_k119_25218 ChuDM_2017_SRR8942396_bin.6_k119_25218_10 7000 8046 + 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd
CAZyme ChuDM_2017_SRR8942396_bin.6_k119_25218 ChuDM_2017_SRR8942396_bin.6_k119_25218_11 8043 9611 + GT83
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_25218_6
Type: TC
Location: 3117 - 3917 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_25218_7
Type: CAZyme
Location: 3931 - 4659 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_25218_8
Type: CAZyme
Location: 4659 - 6353 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_25218_9
Type: TC
Location: 6356 - 7003 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_25218_10
Type: pfam
Location: 7000 - 8046 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_25218_11
Type: CAZyme
Location: 8043 - 9611 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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