Cluster: ChuDM_2017_SRR8942396_bin.6_CGC36
🧬 Cluster Details
- Gene Count: 23
- CAZyme Count: 1
- Substrate:
- Genome ID: ChuDM_2017_SRR8942396_bin.6
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ChuDM_2017_SRR8942396_bin.6_k119_19754 | ChuDM_2017_SRR8942396_bin.6_k119_19754_248 | 271985 | 272974 | - | GH179 |
| TC | ChuDM_2017_SRR8942396_bin.6_k119_19754 | ChuDM_2017_SRR8942396_bin.6_k119_19754_249 | 272979 | 275657 | - | 1.C.105.2.12 |
| pfam | ChuDM_2017_SRR8942396_bin.6_k119_19754 | ChuDM_2017_SRR8942396_bin.6_k119_19754_250 | 275760 | 276167 | - | ExbD |
| TC | ChuDM_2017_SRR8942396_bin.6_k119_19754 | ChuDM_2017_SRR8942396_bin.6_k119_19754_251 | 276198 | 276899 | - | 1.A.30.2.9 |
| TC | ChuDM_2017_SRR8942396_bin.6_k119_19754 | ChuDM_2017_SRR8942396_bin.6_k119_19754_252 | 277003 | 278424 | - | 3.D.1.5.1 |
| NULL(UNKNOWN) | ChuDM_2017_SRR8942396_bin.6_k119_19754 | ChuDM_2017_SRR8942396_bin.6_k119_19754_253 | 278469 | 278966 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | ChuDM_2017_SRR8942396_bin.6_k119_19754 | ChuDM_2017_SRR8942396_bin.6_k119_19754_254 | 278987 | 280465 | - | 3.D.1.5.1 |
| TC | ChuDM_2017_SRR8942396_bin.6_k119_19754 | ChuDM_2017_SRR8942396_bin.6_k119_19754_255 | 280554 | 282494 | - | 3.D.9.1.1 |
| TC | ChuDM_2017_SRR8942396_bin.6_k119_19754 | ChuDM_2017_SRR8942396_bin.6_k119_19754_256 | 282625 | 282963 | - | 3.D.1.8.1 |
| TC | ChuDM_2017_SRR8942396_bin.6_k119_19754 | ChuDM_2017_SRR8942396_bin.6_k119_19754_257 | 283060 | 283560 | - | 3.D.9.1.1 |
| STP | ChuDM_2017_SRR8942396_bin.6_k119_19754 | ChuDM_2017_SRR8942396_bin.6_k119_19754_258 | 283600 | 284499 | - | Fer4 | Fer4 |
| TC | ChuDM_2017_SRR8942396_bin.6_k119_19754 | ChuDM_2017_SRR8942396_bin.6_k119_19754_259 | 284539 | 285636 | - | 3.D.1.5.1 |
| TC | ChuDM_2017_SRR8942396_bin.6_k119_19754 | ChuDM_2017_SRR8942396_bin.6_k119_19754_260 | 285672 | 287300 | - | 3.D.1.5.1 |
| TC | ChuDM_2017_SRR8942396_bin.6_k119_19754 | ChuDM_2017_SRR8942396_bin.6_k119_19754_261 | 287335 | 287934 | - | 3.D.1.1.1 |
| TC | ChuDM_2017_SRR8942396_bin.6_k119_19754 | ChuDM_2017_SRR8942396_bin.6_k119_19754_262 | 287904 | 288254 | - | 3.D.1.8.1 |
| NULL(UNKNOWN) | ChuDM_2017_SRR8942396_bin.6_k119_19754 | ChuDM_2017_SRR8942396_bin.6_k119_19754_263 | 288527 | 288991 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | ChuDM_2017_SRR8942396_bin.6_k119_19754 | ChuDM_2017_SRR8942396_bin.6_k119_19754_264 | 289032 | 290051 | + | Aminotran_4 |
| TC | ChuDM_2017_SRR8942396_bin.6_k119_19754 | ChuDM_2017_SRR8942396_bin.6_k119_19754_265 | 290071 | 290880 | + | 1.B.42.1.2 |
| pfam | ChuDM_2017_SRR8942396_bin.6_k119_19754 | ChuDM_2017_SRR8942396_bin.6_k119_19754_266 | 290923 | 291354 | + | RuvX |
| pfam | ChuDM_2017_SRR8942396_bin.6_k119_19754 | ChuDM_2017_SRR8942396_bin.6_k119_19754_267 | 291351 | 291914 | + | Pep_deformylase |
| TC | ChuDM_2017_SRR8942396_bin.6_k119_19754 | ChuDM_2017_SRR8942396_bin.6_k119_19754_268 | 291920 | 292705 | + | 1.B.18.3.3 |
| pfam | ChuDM_2017_SRR8942396_bin.6_k119_19754 | ChuDM_2017_SRR8942396_bin.6_k119_19754_269 | 292702 | 293466 | + | Poly_export |
| TC | ChuDM_2017_SRR8942396_bin.6_k119_19754 | ChuDM_2017_SRR8942396_bin.6_k119_19754_270 | 293495 | 295870 | + | 8.A.3.3.4 |
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_19754_248
Type: CAZyme
Location: 271985 - 272974 (-)
Type: CAZyme
Location: 271985 - 272974 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_19754_249
Type: TC
Location: 272979 - 275657 (-)
Type: TC
Location: 272979 - 275657 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_19754_250
Type: pfam
Location: 275760 - 276167 (-)
Type: pfam
Location: 275760 - 276167 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_19754_251
Type: TC
Location: 276198 - 276899 (-)
Type: TC
Location: 276198 - 276899 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_19754_252
Type: TC
Location: 277003 - 278424 (-)
Type: TC
Location: 277003 - 278424 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_19754_253
Type:
Location: 278469 - 278966 (-)
Type:
Location: 278469 - 278966 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_19754_254
Type: TC
Location: 278987 - 280465 (-)
Type: TC
Location: 278987 - 280465 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_19754_255
Type: TC
Location: 280554 - 282494 (-)
Type: TC
Location: 280554 - 282494 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_19754_256
Type: TC
Location: 282625 - 282963 (-)
Type: TC
Location: 282625 - 282963 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_19754_257
Type: TC
Location: 283060 - 283560 (-)
Type: TC
Location: 283060 - 283560 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_19754_258
Type: STP
Location: 283600 - 284499 (-)
Type: STP
Location: 283600 - 284499 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_19754_259
Type: TC
Location: 284539 - 285636 (-)
Type: TC
Location: 284539 - 285636 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_19754_260
Type: TC
Location: 285672 - 287300 (-)
Type: TC
Location: 285672 - 287300 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_19754_261
Type: TC
Location: 287335 - 287934 (-)
Type: TC
Location: 287335 - 287934 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_19754_262
Type: TC
Location: 287904 - 288254 (-)
Type: TC
Location: 287904 - 288254 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_19754_263
Type:
Location: 288527 - 288991 (+)
Type:
Location: 288527 - 288991 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_19754_264
Type: pfam
Location: 289032 - 290051 (+)
Type: pfam
Location: 289032 - 290051 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_19754_265
Type: TC
Location: 290071 - 290880 (+)
Type: TC
Location: 290071 - 290880 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_19754_266
Type: pfam
Location: 290923 - 291354 (+)
Type: pfam
Location: 290923 - 291354 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_19754_267
Type: pfam
Location: 291351 - 291914 (+)
Type: pfam
Location: 291351 - 291914 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_19754_268
Type: TC
Location: 291920 - 292705 (+)
Type: TC
Location: 291920 - 292705 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_19754_269
Type: pfam
Location: 292702 - 293466 (+)
Type: pfam
Location: 292702 - 293466 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_19754_270
Type: TC
Location: 293495 - 295870 (+)
Type: TC
Location: 293495 - 295870 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Dysgonomonadaceae
Genus
Dysgonomonas
Species
Dysgonomonas sp003523545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.