Cluster: ChuDM_2017_SRR8942396_bin.6_CGC30
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 9
- Substrate:
- Genome ID: ChuDM_2017_SRR8942396_bin.6
- CGC Family ID: CGCFAM_00069
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ChuDM_2017_SRR8942396_bin.6_k119_17403 | ChuDM_2017_SRR8942396_bin.6_k119_17403_42 | 48363 | 49400 | - | GT27 |
| pfam | ChuDM_2017_SRR8942396_bin.6_k119_17403 | ChuDM_2017_SRR8942396_bin.6_k119_17403_43 | 49397 | 50290 | - | Lip_A_acyltrans |
| pfam | ChuDM_2017_SRR8942396_bin.6_k119_17403 | ChuDM_2017_SRR8942396_bin.6_k119_17403_44 | 50293 | 51603 | - | UPF0004 | Radical_SAM |
| TC | ChuDM_2017_SRR8942396_bin.6_k119_17403 | ChuDM_2017_SRR8942396_bin.6_k119_17403_45 | 51782 | 53443 | + | 4.C.1.1.4 |
| pfam | ChuDM_2017_SRR8942396_bin.6_k119_17403 | ChuDM_2017_SRR8942396_bin.6_k119_17403_46 | 53562 | 54428 | + | ABC2_membrane |
| TC | ChuDM_2017_SRR8942396_bin.6_k119_17403 | ChuDM_2017_SRR8942396_bin.6_k119_17403_47 | 54480 | 55778 | + | 3.A.1.103.5 |
| pfam | ChuDM_2017_SRR8942396_bin.6_k119_17403 | ChuDM_2017_SRR8942396_bin.6_k119_17403_48 | 55778 | 56533 | + | Methyltransf_21 |
| CAZyme | ChuDM_2017_SRR8942396_bin.6_k119_17403 | ChuDM_2017_SRR8942396_bin.6_k119_17403_49 | 56533 | 57315 | + | GT2 |
| CAZyme | ChuDM_2017_SRR8942396_bin.6_k119_17403 | ChuDM_2017_SRR8942396_bin.6_k119_17403_50 | 57315 | 58226 | + | GT2 |
| CAZyme | ChuDM_2017_SRR8942396_bin.6_k119_17403 | ChuDM_2017_SRR8942396_bin.6_k119_17403_51 | 58223 | 59227 | + | GT2 |
| pfam | ChuDM_2017_SRR8942396_bin.6_k119_17403 | ChuDM_2017_SRR8942396_bin.6_k119_17403_52 | 59232 | 60086 | + | Glycos_transf_2 |
| CAZyme | ChuDM_2017_SRR8942396_bin.6_k119_17403 | ChuDM_2017_SRR8942396_bin.6_k119_17403_53 | 60087 | 60983 | + | GT2 |
| CAZyme | ChuDM_2017_SRR8942396_bin.6_k119_17403 | ChuDM_2017_SRR8942396_bin.6_k119_17403_54 | 60992 | 62284 | + | GT4 |
| CAZyme | ChuDM_2017_SRR8942396_bin.6_k119_17403 | ChuDM_2017_SRR8942396_bin.6_k119_17403_55 | 62268 | 63425 | + | GT4 |
| CAZyme | ChuDM_2017_SRR8942396_bin.6_k119_17403 | ChuDM_2017_SRR8942396_bin.6_k119_17403_56 | 63428 | 64231 | + | GT2 |
| CAZyme | ChuDM_2017_SRR8942396_bin.6_k119_17403 | ChuDM_2017_SRR8942396_bin.6_k119_17403_57 | 64233 | 65051 | + | GT2 |
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_17403_42
Type: CAZyme
Location: 48363 - 49400 (-)
Type: CAZyme
Location: 48363 - 49400 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_17403_43
Type: pfam
Location: 49397 - 50290 (-)
Type: pfam
Location: 49397 - 50290 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_17403_44
Type: pfam
Location: 50293 - 51603 (-)
Type: pfam
Location: 50293 - 51603 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_17403_45
Type: TC
Location: 51782 - 53443 (+)
Type: TC
Location: 51782 - 53443 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_17403_46
Type: pfam
Location: 53562 - 54428 (+)
Type: pfam
Location: 53562 - 54428 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_17403_47
Type: TC
Location: 54480 - 55778 (+)
Type: TC
Location: 54480 - 55778 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_17403_48
Type: pfam
Location: 55778 - 56533 (+)
Type: pfam
Location: 55778 - 56533 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_17403_49
Type: CAZyme
Location: 56533 - 57315 (+)
Type: CAZyme
Location: 56533 - 57315 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_17403_50
Type: CAZyme
Location: 57315 - 58226 (+)
Type: CAZyme
Location: 57315 - 58226 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_17403_51
Type: CAZyme
Location: 58223 - 59227 (+)
Type: CAZyme
Location: 58223 - 59227 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_17403_52
Type: pfam
Location: 59232 - 60086 (+)
Type: pfam
Location: 59232 - 60086 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_17403_53
Type: CAZyme
Location: 60087 - 60983 (+)
Type: CAZyme
Location: 60087 - 60983 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_17403_54
Type: CAZyme
Location: 60992 - 62284 (+)
Type: CAZyme
Location: 60992 - 62284 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_17403_55
Type: CAZyme
Location: 62268 - 63425 (+)
Type: CAZyme
Location: 62268 - 63425 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_17403_56
Type: CAZyme
Location: 63428 - 64231 (+)
Type: CAZyme
Location: 63428 - 64231 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_17403_57
Type: CAZyme
Location: 64233 - 65051 (+)
Type: CAZyme
Location: 64233 - 65051 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Dysgonomonadaceae
Genus
Dysgonomonas
Species
Dysgonomonas sp003523545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.