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Cluster: ChuDM_2017_SRR8942396_bin.6_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ChuDM_2017_SRR8942396_bin.6_k119_15686 ChuDM_2017_SRR8942396_bin.6_k119_15686_8 5832 6476 - 2.A.76.1.6
pfam ChuDM_2017_SRR8942396_bin.6_k119_15686 ChuDM_2017_SRR8942396_bin.6_k119_15686_9 6594 7964 - DUF4270
CAZyme ChuDM_2017_SRR8942396_bin.6_k119_15686 ChuDM_2017_SRR8942396_bin.6_k119_15686_10 8060 8869 - GT5
pfam ChuDM_2017_SRR8942396_bin.6_k119_15686 ChuDM_2017_SRR8942396_bin.6_k119_15686_11 9070 9951 + Pantoate_ligase
pfam ChuDM_2017_SRR8942396_bin.6_k119_15686 ChuDM_2017_SRR8942396_bin.6_k119_15686_12 9953 10306 + Asp_decarbox
TC ChuDM_2017_SRR8942396_bin.6_k119_15686 ChuDM_2017_SRR8942396_bin.6_k119_15686_13 10396 11724 + 2.A.66.1.28
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_15686_8
Type: TC
Location: 5832 - 6476 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_15686_9
Type: pfam
Location: 6594 - 7964 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_15686_10
Type: CAZyme
Location: 8060 - 8869 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_15686_11
Type: pfam
Location: 9070 - 9951 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_15686_12
Type: pfam
Location: 9953 - 10306 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_15686_13
Type: TC
Location: 10396 - 11724 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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