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Cluster: ChuDM_2017_SRR8942396_bin.10_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme ChuDM_2017_SRR8942396_bin.10_k119_29566 ChuDM_2017_SRR8942396_bin.10_k119_29566_10 7620 9887 + GT35
TC ChuDM_2017_SRR8942396_bin.10_k119_29566 ChuDM_2017_SRR8942396_bin.10_k119_29566_11 9888 11552 - 3.A.1.1.9
TC ChuDM_2017_SRR8942396_bin.10_k119_29566 ChuDM_2017_SRR8942396_bin.10_k119_29566_12 11549 13282 - 8.A.59.2.1
TF ChuDM_2017_SRR8942396_bin.10_k119_29566 ChuDM_2017_SRR8942396_bin.10_k119_29566_13 13257 14795 - HTH_AraC | HTH_AraC
TC ChuDM_2017_SRR8942396_bin.10_k119_29566 ChuDM_2017_SRR8942396_bin.10_k119_29566_14 14966 15802 - 3.A.1.1.45
TC ChuDM_2017_SRR8942396_bin.10_k119_29566 ChuDM_2017_SRR8942396_bin.10_k119_29566_15 15802 16656 - 3.A.1.1.45
TC ChuDM_2017_SRR8942396_bin.10_k119_29566 ChuDM_2017_SRR8942396_bin.10_k119_29566_16 16780 18054 - 3.A.1.1.45
Gene ID: ChuDM_2017_SRR8942396_bin.10_k119_29566_10
Type: CAZyme
Location: 7620 - 9887 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.10_k119_29566_11
Type: TC
Location: 9888 - 11552 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.10_k119_29566_12
Type: TC
Location: 11549 - 13282 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.10_k119_29566_13
Type: TF
Location: 13257 - 14795 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.10_k119_29566_14
Type: TC
Location: 14966 - 15802 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.10_k119_29566_15
Type: TC
Location: 15802 - 16656 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.10_k119_29566_16
Type: TC
Location: 16780 - 18054 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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