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Cluster: ChuDM_2017_SRR8942396_bin.10_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ChuDM_2017_SRR8942396_bin.10_k119_27375 ChuDM_2017_SRR8942396_bin.10_k119_27375_137 155749 157038 - 9.A.40.2.4
TC ChuDM_2017_SRR8942396_bin.10_k119_27375 ChuDM_2017_SRR8942396_bin.10_k119_27375_138 157179 158504 - 2.A.25.1.4
pfam ChuDM_2017_SRR8942396_bin.10_k119_27375 ChuDM_2017_SRR8942396_bin.10_k119_27375_139 158631 159290 - ABC2_membrane_5
TC ChuDM_2017_SRR8942396_bin.10_k119_27375 ChuDM_2017_SRR8942396_bin.10_k119_27375_140 159287 160138 - 3.A.1.149.1
TF ChuDM_2017_SRR8942396_bin.10_k119_27375 ChuDM_2017_SRR8942396_bin.10_k119_27375_141 160142 160513 - GntR
pfam ChuDM_2017_SRR8942396_bin.10_k119_27375 ChuDM_2017_SRR8942396_bin.10_k119_27375_142 160673 161227 - DUF5662
CAZyme ChuDM_2017_SRR8942396_bin.10_k119_27375 ChuDM_2017_SRR8942396_bin.10_k119_27375_143 161231 163075 - GH13_11
Gene ID: ChuDM_2017_SRR8942396_bin.10_k119_27375_137
Type: TC
Location: 155749 - 157038 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.10_k119_27375_138
Type: TC
Location: 157179 - 158504 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.10_k119_27375_139
Type: pfam
Location: 158631 - 159290 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.10_k119_27375_140
Type: TC
Location: 159287 - 160138 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.10_k119_27375_141
Type: TF
Location: 160142 - 160513 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.10_k119_27375_142
Type: pfam
Location: 160673 - 161227 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.10_k119_27375_143
Type: CAZyme
Location: 161231 - 163075 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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