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Cluster: ChuDM_2017_SRR8942396_bin.10_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme ChuDM_2017_SRR8942396_bin.10_k119_24173 ChuDM_2017_SRR8942396_bin.10_k119_24173_43 46926 49160 - CBM48 | GH13_9
STP ChuDM_2017_SRR8942396_bin.10_k119_24173 ChuDM_2017_SRR8942396_bin.10_k119_24173_44 49341 50312 + PfkB
peptidase ChuDM_2017_SRR8942396_bin.10_k119_24173 ChuDM_2017_SRR8942396_bin.10_k119_24173_45 50539 51906 + M20.UNW
TC ChuDM_2017_SRR8942396_bin.10_k119_24173 ChuDM_2017_SRR8942396_bin.10_k119_24173_46 51903 52982 + 3.A.1.11.1
TC ChuDM_2017_SRR8942396_bin.10_k119_24173 ChuDM_2017_SRR8942396_bin.10_k119_24173_47 52984 53850 + 3.A.1.11.1
TC ChuDM_2017_SRR8942396_bin.10_k119_24173 ChuDM_2017_SRR8942396_bin.10_k119_24173_48 53847 54653 + 3.A.1.11.2
TC ChuDM_2017_SRR8942396_bin.10_k119_24173 ChuDM_2017_SRR8942396_bin.10_k119_24173_49 54704 55735 + 3.A.1.11.1
TC ChuDM_2017_SRR8942396_bin.10_k119_24173 ChuDM_2017_SRR8942396_bin.10_k119_24173_50 55757 57385 + 8.A.7.1.1
Gene ID: ChuDM_2017_SRR8942396_bin.10_k119_24173_43
Type: CAZyme
Location: 46926 - 49160 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.10_k119_24173_44
Type: STP
Location: 49341 - 50312 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.10_k119_24173_45
Type: peptidase
Location: 50539 - 51906 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.10_k119_24173_46
Type: TC
Location: 51903 - 52982 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.10_k119_24173_47
Type: TC
Location: 52984 - 53850 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.10_k119_24173_48
Type: TC
Location: 53847 - 54653 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.10_k119_24173_49
Type: TC
Location: 54704 - 55735 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.10_k119_24173_50
Type: TC
Location: 55757 - 57385 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
ChuDM_2017_SRR8942396_bin.10_k119_24173_47 vegan > omnivore 1.08197 0.03476

🧭 Explore Read Mapping of CGC

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