Cluster: ChuDM_2017_SRR8942396_bin.10_CGC21
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ChuDM_2017_SRR8942396_bin.10
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ChuDM_2017_SRR8942396_bin.10_k119_23275 | ChuDM_2017_SRR8942396_bin.10_k119_23275_5 | 3562 | 5049 | - | 9.A.11.1.2 |
| TF | ChuDM_2017_SRR8942396_bin.10_k119_23275 | ChuDM_2017_SRR8942396_bin.10_k119_23275_6 | 5178 | 5879 | - | GntR |
| pfam | ChuDM_2017_SRR8942396_bin.10_k119_23275 | ChuDM_2017_SRR8942396_bin.10_k119_23275_7 | 5915 | 6790 | - | GHMP_kinases_N | GHMP_kinases_C |
| CAZyme | ChuDM_2017_SRR8942396_bin.10_k119_23275 | ChuDM_2017_SRR8942396_bin.10_k119_23275_8 | 6884 | 8440 | - | CBM50 |
Gene ID: ChuDM_2017_SRR8942396_bin.10_k119_23275_5
Type: TC
Location: 3562 - 5049 (-)
Type: TC
Location: 3562 - 5049 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.10_k119_23275_6
Type: TF
Location: 5178 - 5879 (-)
Type: TF
Location: 5178 - 5879 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.10_k119_23275_7
Type: pfam
Location: 5915 - 6790 (-)
Type: pfam
Location: 5915 - 6790 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.10_k119_23275_8
Type: CAZyme
Location: 6884 - 8440 (-)
Type: CAZyme
Location: 6884 - 8440 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Blautia_A
Species
Blautia_A sp937880195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| ChuDM_2017_SRR8942396_bin.10_k119_23275_6 | vegan > omnivore | 1.72272 | 0.03476 |
| ChuDM_2017_SRR8942396_bin.10_k119_23275_6 | vegetarian > omnivore | 1.57633 | 0.03728 |