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Cluster: ChuDM_2017_SRR8942396_bin.10_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme ChuDM_2017_SRR8942396_bin.10_k119_16887 ChuDM_2017_SRR8942396_bin.10_k119_16887_117 130655 131620 + GT2
pfam ChuDM_2017_SRR8942396_bin.10_k119_16887 ChuDM_2017_SRR8942396_bin.10_k119_16887_118 131601 133070 + PMT_2
TF ChuDM_2017_SRR8942396_bin.10_k119_16887 ChuDM_2017_SRR8942396_bin.10_k119_16887_119 133326 133943 + GntR
CAZyme ChuDM_2017_SRR8942396_bin.10_k119_16887 ChuDM_2017_SRR8942396_bin.10_k119_16887_120 133949 134626 + GH30_1
STP ChuDM_2017_SRR8942396_bin.10_k119_16887 ChuDM_2017_SRR8942396_bin.10_k119_16887_121 134684 135265 - TetR_N
TC ChuDM_2017_SRR8942396_bin.10_k119_16887 ChuDM_2017_SRR8942396_bin.10_k119_16887_122 135587 138877 + 9.B.74.1.3
Gene ID: ChuDM_2017_SRR8942396_bin.10_k119_16887_117
Type: CAZyme
Location: 130655 - 131620 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.10_k119_16887_118
Type: pfam
Location: 131601 - 133070 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.10_k119_16887_119
Type: TF
Location: 133326 - 133943 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.10_k119_16887_120
Type: CAZyme
Location: 133949 - 134626 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.10_k119_16887_121
Type: STP
Location: 134684 - 135265 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.10_k119_16887_122
Type: TC
Location: 135587 - 138877 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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