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Cluster: ChuDM_2017_SRR8942396_bin.10_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ChuDM_2017_SRR8942396_bin.10_k119_6290 ChuDM_2017_SRR8942396_bin.10_k119_6290_67 86679 88319 - 3.A.1.121.4
TC ChuDM_2017_SRR8942396_bin.10_k119_6290 ChuDM_2017_SRR8942396_bin.10_k119_6290_68 88534 89223 + 5.A.1.2.4
TF ChuDM_2017_SRR8942396_bin.10_k119_6290 ChuDM_2017_SRR8942396_bin.10_k119_6290_69 89356 89754 + Rrf2
STP ChuDM_2017_SRR8942396_bin.10_k119_6290 ChuDM_2017_SRR8942396_bin.10_k119_6290_70 89961 93500 + Fer4
TC ChuDM_2017_SRR8942396_bin.10_k119_6290 ChuDM_2017_SRR8942396_bin.10_k119_6290_71 93557 96334 + 9.B.144.1.5
CAZyme ChuDM_2017_SRR8942396_bin.10_k119_6290 ChuDM_2017_SRR8942396_bin.10_k119_6290_72 96331 97290 + GT2
Gene ID: ChuDM_2017_SRR8942396_bin.10_k119_6290_67
Type: TC
Location: 86679 - 88319 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.10_k119_6290_68
Type: TC
Location: 88534 - 89223 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.10_k119_6290_69
Type: TF
Location: 89356 - 89754 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.10_k119_6290_70
Type: STP
Location: 89961 - 93500 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.10_k119_6290_71
Type: TC
Location: 93557 - 96334 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.10_k119_6290_72
Type: CAZyme
Location: 96331 - 97290 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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