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Cluster: ChuDM_2017_SRR8942396_bin.10_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ChuDM_2017_SRR8942396_bin.10_k119_6044 ChuDM_2017_SRR8942396_bin.10_k119_6044_70 87046 88338 - 2.A.49.9.3
TC ChuDM_2017_SRR8942396_bin.10_k119_6044 ChuDM_2017_SRR8942396_bin.10_k119_6044_71 88344 90917 - 3.A.3.5.15
pfam ChuDM_2017_SRR8942396_bin.10_k119_6044 ChuDM_2017_SRR8942396_bin.10_k119_6044_72 90936 91241 - Trns_repr_metal
pfam ChuDM_2017_SRR8942396_bin.10_k119_6044 ChuDM_2017_SRR8942396_bin.10_k119_6044_73 91416 92759 - MatE | MatE
TC ChuDM_2017_SRR8942396_bin.10_k119_6044 ChuDM_2017_SRR8942396_bin.10_k119_6044_74 92974 93876 + 2.A.69.4.3
pfam ChuDM_2017_SRR8942396_bin.10_k119_6044 ChuDM_2017_SRR8942396_bin.10_k119_6044_75 93932 94540 + G3P_acyltransf
CAZyme ChuDM_2017_SRR8942396_bin.10_k119_6044 ChuDM_2017_SRR8942396_bin.10_k119_6044_76 94537 95661 + GT28
Gene ID: ChuDM_2017_SRR8942396_bin.10_k119_6044_70
Type: TC
Location: 87046 - 88338 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.10_k119_6044_71
Type: TC
Location: 88344 - 90917 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.10_k119_6044_72
Type: pfam
Location: 90936 - 91241 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.10_k119_6044_73
Type: pfam
Location: 91416 - 92759 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.10_k119_6044_74
Type: TC
Location: 92974 - 93876 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.10_k119_6044_75
Type: pfam
Location: 93932 - 94540 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.10_k119_6044_76
Type: CAZyme
Location: 94537 - 95661 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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