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Cluster: ChuDM_2017_SRR8942396_bin.10_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ChuDM_2017_SRR8942396_bin.10_k119_372 ChuDM_2017_SRR8942396_bin.10_k119_372_3 3753 4391 - 2.A.115.1.5
TF ChuDM_2017_SRR8942396_bin.10_k119_372 ChuDM_2017_SRR8942396_bin.10_k119_372_4 4468 5268 + MerR
TC ChuDM_2017_SRR8942396_bin.10_k119_372 ChuDM_2017_SRR8942396_bin.10_k119_372_5 5423 7771 - 9.A.8.1.6
CAZyme ChuDM_2017_SRR8942396_bin.10_k119_372 ChuDM_2017_SRR8942396_bin.10_k119_372_6 7985 9661 + GH13_31
Gene ID: ChuDM_2017_SRR8942396_bin.10_k119_372_3
Type: TC
Location: 3753 - 4391 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.10_k119_372_4
Type: TF
Location: 4468 - 5268 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.10_k119_372_5
Type: TC
Location: 5423 - 7771 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.10_k119_372_6
Type: CAZyme
Location: 7985 - 9661 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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