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Cluster: ChuDM_2017_SRR8942395_bin.4_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ChuDM_2017_SRR8942395_bin.4_k119_4126 ChuDM_2017_SRR8942395_bin.4_k119_4126_10 13686 15368 + 2.A.66.4.4
pfam ChuDM_2017_SRR8942395_bin.4_k119_4126 ChuDM_2017_SRR8942395_bin.4_k119_4126_11 15375 17315 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC ChuDM_2017_SRR8942395_bin.4_k119_4126 ChuDM_2017_SRR8942395_bin.4_k119_4126_12 17681 19294 + 3.A.1.5.27
TC ChuDM_2017_SRR8942395_bin.4_k119_4126 ChuDM_2017_SRR8942395_bin.4_k119_4126_13 19452 20408 + 3.A.1.5.38
TC ChuDM_2017_SRR8942395_bin.4_k119_4126 ChuDM_2017_SRR8942395_bin.4_k119_4126_14 20412 22427 + 3.A.1.5.25
TC ChuDM_2017_SRR8942395_bin.4_k119_4126 ChuDM_2017_SRR8942395_bin.4_k119_4126_15 22428 23255 + 3.A.1.5.27
CAZyme ChuDM_2017_SRR8942395_bin.4_k119_4126 ChuDM_2017_SRR8942395_bin.4_k119_4126_16 23387 24313 + CE7
Gene ID: ChuDM_2017_SRR8942395_bin.4_k119_4126_10
Type: TC
Location: 13686 - 15368 (+)
Gene ID: ChuDM_2017_SRR8942395_bin.4_k119_4126_11
Type: pfam
Location: 15375 - 17315 (+)
Gene ID: ChuDM_2017_SRR8942395_bin.4_k119_4126_12
Type: TC
Location: 17681 - 19294 (+)
Gene ID: ChuDM_2017_SRR8942395_bin.4_k119_4126_13
Type: TC
Location: 19452 - 20408 (+)
Gene ID: ChuDM_2017_SRR8942395_bin.4_k119_4126_14
Type: TC
Location: 20412 - 22427 (+)
Gene ID: ChuDM_2017_SRR8942395_bin.4_k119_4126_15
Type: TC
Location: 22428 - 23255 (+)
Gene ID: ChuDM_2017_SRR8942395_bin.4_k119_4126_16
Type: CAZyme
Location: 23387 - 24313 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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