dbCAN HGM

Cluster: ChuDM_2017_SRR8942393_bin.2_CGC2

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	ChuDM_2017_SRR8942393_bin.2_k119_557	ChuDM_2017_SRR8942393_bin.2_k119_557_20	23841	24767	-	CE7
TC	ChuDM_2017_SRR8942393_bin.2_k119_557	ChuDM_2017_SRR8942393_bin.2_k119_557_21	24899	25726	-	3.A.1.5.27
TC	ChuDM_2017_SRR8942393_bin.2_k119_557	ChuDM_2017_SRR8942393_bin.2_k119_557_22	25727	27742	-	3.A.1.5.25
TC	ChuDM_2017_SRR8942393_bin.2_k119_557	ChuDM_2017_SRR8942393_bin.2_k119_557_23	27746	28702	-	3.A.1.5.38
TC	ChuDM_2017_SRR8942393_bin.2_k119_557	ChuDM_2017_SRR8942393_bin.2_k119_557_24	28860	30473	-	3.A.1.5.27
pfam	ChuDM_2017_SRR8942393_bin.2_k119_557	ChuDM_2017_SRR8942393_bin.2_k119_557_25	30838	32778	-	GIY-YIG \| UVR \| UvrC_RNaseH_dom \| HHH_2 \| HHH_5 \| UvrC_RNaseH
TC	ChuDM_2017_SRR8942393_bin.2_k119_557	ChuDM_2017_SRR8942393_bin.2_k119_557_26	32785	34467	-	2.A.66.4.4

Gene ID: ChuDM_2017_SRR8942393_bin.2_k119_557_20
Type: CAZyme
Location: 23841 - 24767 (-)

Gene ID: ChuDM_2017_SRR8942393_bin.2_k119_557_21
Type: TC
Location: 24899 - 25726 (-)

Gene ID: ChuDM_2017_SRR8942393_bin.2_k119_557_22
Type: TC
Location: 25727 - 27742 (-)

Gene ID: ChuDM_2017_SRR8942393_bin.2_k119_557_23
Type: TC
Location: 27746 - 28702 (-)

Gene ID: ChuDM_2017_SRR8942393_bin.2_k119_557_24
Type: TC
Location: 28860 - 30473 (-)

Gene ID: ChuDM_2017_SRR8942393_bin.2_k119_557_25
Type: pfam
Location: 30838 - 32778 (-)

Gene ID: ChuDM_2017_SRR8942393_bin.2_k119_557_26
Type: TC
Location: 32785 - 34467 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.