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Cluster: ChuDM_2017_SRR8942393_bin.2_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ChuDM_2017_SRR8942393_bin.2_k119_11872 ChuDM_2017_SRR8942393_bin.2_k119_11872_78 98272 99831 + 2.A.2.5.1
CAZyme ChuDM_2017_SRR8942393_bin.2_k119_11872 ChuDM_2017_SRR8942393_bin.2_k119_11872_79 99947 101542 + GH28
peptidase ChuDM_2017_SRR8942393_bin.2_k119_11872 ChuDM_2017_SRR8942393_bin.2_k119_11872_80 101647 102456 + S09.UPW
CAZyme ChuDM_2017_SRR8942393_bin.2_k119_11872 ChuDM_2017_SRR8942393_bin.2_k119_11872_81 102453 104618 + CE19 | CE8
pfam ChuDM_2017_SRR8942393_bin.2_k119_11872 ChuDM_2017_SRR8942393_bin.2_k119_11872_82 104688 105356 + Lipase_GDSL | Lipase_GDSL_2
CAZyme ChuDM_2017_SRR8942393_bin.2_k119_11872 ChuDM_2017_SRR8942393_bin.2_k119_11872_83 105464 106702 + GH105
Gene ID: ChuDM_2017_SRR8942393_bin.2_k119_11872_78
Type: TC
Location: 98272 - 99831 (+)
Gene ID: ChuDM_2017_SRR8942393_bin.2_k119_11872_79
Type: CAZyme
Location: 99947 - 101542 (+)
Gene ID: ChuDM_2017_SRR8942393_bin.2_k119_11872_80
Type: peptidase
Location: 101647 - 102456 (+)
Gene ID: ChuDM_2017_SRR8942393_bin.2_k119_11872_81
Type: CAZyme
Location: 102453 - 104618 (+)
Gene ID: ChuDM_2017_SRR8942393_bin.2_k119_11872_82
Type: pfam
Location: 104688 - 105356 (+)
Gene ID: ChuDM_2017_SRR8942393_bin.2_k119_11872_83
Type: CAZyme
Location: 105464 - 106702 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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