dbCAN HGM

Cluster: ChuDM_2017_SRR8942393_bin.2_CGC16

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	ChuDM_2017_SRR8942393_bin.2_k119_11872	ChuDM_2017_SRR8942393_bin.2_k119_11872_66	82309	85317	+	GH2
NULL(UNKNOWN)	ChuDM_2017_SRR8942393_bin.2_k119_11872	ChuDM_2017_SRR8942393_bin.2_k119_11872_67	85321	85776	+	NULL(UNKNOWN) [View Structural Homologs]
TC	ChuDM_2017_SRR8942393_bin.2_k119_11872	ChuDM_2017_SRR8942393_bin.2_k119_11872_68	85930	87393	+	2.A.3.7.4
STP	ChuDM_2017_SRR8942393_bin.2_k119_11872	ChuDM_2017_SRR8942393_bin.2_k119_11872_69	87815	88063	+	PTS-HPr
STP	ChuDM_2017_SRR8942393_bin.2_k119_11872	ChuDM_2017_SRR8942393_bin.2_k119_11872_70	88252	88494	+	FeoA
TC	ChuDM_2017_SRR8942393_bin.2_k119_11872	ChuDM_2017_SRR8942393_bin.2_k119_11872_71	88535	88756	+	9.A.8.1.6
TC	ChuDM_2017_SRR8942393_bin.2_k119_11872	ChuDM_2017_SRR8942393_bin.2_k119_11872_72	88880	91207	+	9.A.8.1.6

Gene ID: ChuDM_2017_SRR8942393_bin.2_k119_11872_66
Type: CAZyme
Location: 82309 - 85317 (+)

Gene ID: ChuDM_2017_SRR8942393_bin.2_k119_11872_67
Type:
Location: 85321 - 85776 (+)

Gene ID: ChuDM_2017_SRR8942393_bin.2_k119_11872_68
Type: TC
Location: 85930 - 87393 (+)

Gene ID: ChuDM_2017_SRR8942393_bin.2_k119_11872_69
Type: STP
Location: 87815 - 88063 (+)

Gene ID: ChuDM_2017_SRR8942393_bin.2_k119_11872_70
Type: STP
Location: 88252 - 88494 (+)

Gene ID: ChuDM_2017_SRR8942393_bin.2_k119_11872_71
Type: TC
Location: 88535 - 88756 (+)

Gene ID: ChuDM_2017_SRR8942393_bin.2_k119_11872_72
Type: TC
Location: 88880 - 91207 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.