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Cluster: ChuDM_2017_SRR8942393_bin.2_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme ChuDM_2017_SRR8942393_bin.2_k119_8162 ChuDM_2017_SRR8942393_bin.2_k119_8162_51 64306 65475 - CE9
STP ChuDM_2017_SRR8942393_bin.2_k119_8162 ChuDM_2017_SRR8942393_bin.2_k119_8162_52 65595 66761 - SIS | SIS
TF ChuDM_2017_SRR8942393_bin.2_k119_8162 ChuDM_2017_SRR8942393_bin.2_k119_8162_53 66876 67607 - GntR
TC ChuDM_2017_SRR8942393_bin.2_k119_8162 ChuDM_2017_SRR8942393_bin.2_k119_8162_54 67792 68874 - 4.A.6.1.4
TC ChuDM_2017_SRR8942393_bin.2_k119_8162 ChuDM_2017_SRR8942393_bin.2_k119_8162_55 68864 69664 - 4.A.6.1.4
TC ChuDM_2017_SRR8942393_bin.2_k119_8162 ChuDM_2017_SRR8942393_bin.2_k119_8162_56 69755 70237 - 4.A.6.1.4
pfam ChuDM_2017_SRR8942393_bin.2_k119_8162 ChuDM_2017_SRR8942393_bin.2_k119_8162_57 70274 70555 - YajC
TC ChuDM_2017_SRR8942393_bin.2_k119_8162 ChuDM_2017_SRR8942393_bin.2_k119_8162_58 70555 70998 - 4.A.6.1.16
Gene ID: ChuDM_2017_SRR8942393_bin.2_k119_8162_51
Type: CAZyme
Location: 64306 - 65475 (-)
Gene ID: ChuDM_2017_SRR8942393_bin.2_k119_8162_52
Type: STP
Location: 65595 - 66761 (-)
Gene ID: ChuDM_2017_SRR8942393_bin.2_k119_8162_53
Type: TF
Location: 66876 - 67607 (-)
Gene ID: ChuDM_2017_SRR8942393_bin.2_k119_8162_54
Type: TC
Location: 67792 - 68874 (-)
Gene ID: ChuDM_2017_SRR8942393_bin.2_k119_8162_55
Type: TC
Location: 68864 - 69664 (-)
Gene ID: ChuDM_2017_SRR8942393_bin.2_k119_8162_56
Type: TC
Location: 69755 - 70237 (-)
Gene ID: ChuDM_2017_SRR8942393_bin.2_k119_8162_57
Type: pfam
Location: 70274 - 70555 (-)
Gene ID: ChuDM_2017_SRR8942393_bin.2_k119_8162_58
Type: TC
Location: 70555 - 70998 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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