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Cluster: ChuDM_2017_SRR8942393_bin.2_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme ChuDM_2017_SRR8942393_bin.2_k119_557 ChuDM_2017_SRR8942393_bin.2_k119_557_1 331 2064 - GH13_30
STP ChuDM_2017_SRR8942393_bin.2_k119_557 ChuDM_2017_SRR8942393_bin.2_k119_557_2 2650 3396 - STAS
STP ChuDM_2017_SRR8942393_bin.2_k119_557 ChuDM_2017_SRR8942393_bin.2_k119_557_3 3475 5820 - GAF | SpoIIE
TC ChuDM_2017_SRR8942393_bin.2_k119_557 ChuDM_2017_SRR8942393_bin.2_k119_557_4 6567 7595 - 3.A.1.5.36
TC ChuDM_2017_SRR8942393_bin.2_k119_557 ChuDM_2017_SRR8942393_bin.2_k119_557_5 7595 8686 - 3.A.1.5.34
TC ChuDM_2017_SRR8942393_bin.2_k119_557 ChuDM_2017_SRR8942393_bin.2_k119_557_6 8689 9624 - 3.A.1.5.11
TC ChuDM_2017_SRR8942393_bin.2_k119_557 ChuDM_2017_SRR8942393_bin.2_k119_557_7 9639 10676 - 3.A.1.5.37
TC ChuDM_2017_SRR8942393_bin.2_k119_557 ChuDM_2017_SRR8942393_bin.2_k119_557_8 10833 12509 - 3.A.1.5.35
Gene ID: ChuDM_2017_SRR8942393_bin.2_k119_557_1
Type: CAZyme
Location: 331 - 2064 (-)
Gene ID: ChuDM_2017_SRR8942393_bin.2_k119_557_2
Type: STP
Location: 2650 - 3396 (-)
Gene ID: ChuDM_2017_SRR8942393_bin.2_k119_557_3
Type: STP
Location: 3475 - 5820 (-)
Gene ID: ChuDM_2017_SRR8942393_bin.2_k119_557_4
Type: TC
Location: 6567 - 7595 (-)
Gene ID: ChuDM_2017_SRR8942393_bin.2_k119_557_5
Type: TC
Location: 7595 - 8686 (-)
Gene ID: ChuDM_2017_SRR8942393_bin.2_k119_557_6
Type: TC
Location: 8689 - 9624 (-)
Gene ID: ChuDM_2017_SRR8942393_bin.2_k119_557_7
Type: TC
Location: 9639 - 10676 (-)
Gene ID: ChuDM_2017_SRR8942393_bin.2_k119_557_8
Type: TC
Location: 10833 - 12509 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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