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Cluster: ChuDM_2017_SRR8942385_bin.6_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme ChuDM_2017_SRR8942385_bin.6_k119_21182 ChuDM_2017_SRR8942385_bin.6_k119_21182_6 7236 7991 - GH25
TC ChuDM_2017_SRR8942385_bin.6_k119_21182 ChuDM_2017_SRR8942385_bin.6_k119_21182_7 8099 9388 - 2.A.26.1.1
STP ChuDM_2017_SRR8942385_bin.6_k119_21182 ChuDM_2017_SRR8942385_bin.6_k119_21182_8 9504 9674 - Fer4 | Fer4
TC ChuDM_2017_SRR8942385_bin.6_k119_21182 ChuDM_2017_SRR8942385_bin.6_k119_21182_9 9940 12495 + 3.A.9.1.2
pfam ChuDM_2017_SRR8942385_bin.6_k119_21182 ChuDM_2017_SRR8942385_bin.6_k119_21182_10 12480 12992 + DUF4358
CAZyme ChuDM_2017_SRR8942385_bin.6_k119_21182 ChuDM_2017_SRR8942385_bin.6_k119_21182_11 13096 14574 + GH77
Gene ID: ChuDM_2017_SRR8942385_bin.6_k119_21182_6
Type: CAZyme
Location: 7236 - 7991 (-)
Gene ID: ChuDM_2017_SRR8942385_bin.6_k119_21182_7
Type: TC
Location: 8099 - 9388 (-)
Gene ID: ChuDM_2017_SRR8942385_bin.6_k119_21182_8
Type: STP
Location: 9504 - 9674 (-)
Gene ID: ChuDM_2017_SRR8942385_bin.6_k119_21182_9
Type: TC
Location: 9940 - 12495 (+)
Gene ID: ChuDM_2017_SRR8942385_bin.6_k119_21182_10
Type: pfam
Location: 12480 - 12992 (+)
Gene ID: ChuDM_2017_SRR8942385_bin.6_k119_21182_11
Type: CAZyme
Location: 13096 - 14574 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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