Cluster: ChuDM_2017_SRR8942385_bin.6_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: ChuDM_2017_SRR8942385_bin.6
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ChuDM_2017_SRR8942385_bin.6_k119_7445 | ChuDM_2017_SRR8942385_bin.6_k119_7445_21 | 23326 | 24819 | - | GH77 |
| TF | ChuDM_2017_SRR8942385_bin.6_k119_7445 | ChuDM_2017_SRR8942385_bin.6_k119_7445_22 | 24824 | 25831 | - | LacI |
| TC | ChuDM_2017_SRR8942385_bin.6_k119_7445 | ChuDM_2017_SRR8942385_bin.6_k119_7445_23 | 25864 | 26700 | - | 3.A.1.1.45 |
| TC | ChuDM_2017_SRR8942385_bin.6_k119_7445 | ChuDM_2017_SRR8942385_bin.6_k119_7445_24 | 26700 | 27542 | - | 3.A.1.1.45 |
| TC | ChuDM_2017_SRR8942385_bin.6_k119_7445 | ChuDM_2017_SRR8942385_bin.6_k119_7445_25 | 27642 | 28988 | - | 3.A.1.1.45 |
Gene ID: ChuDM_2017_SRR8942385_bin.6_k119_7445_21
Type: CAZyme
Location: 23326 - 24819 (-)
Type: CAZyme
Location: 23326 - 24819 (-)
Gene ID: ChuDM_2017_SRR8942385_bin.6_k119_7445_22
Type: TF
Location: 24824 - 25831 (-)
Type: TF
Location: 24824 - 25831 (-)
Gene ID: ChuDM_2017_SRR8942385_bin.6_k119_7445_23
Type: TC
Location: 25864 - 26700 (-)
Type: TC
Location: 25864 - 26700 (-)
Gene ID: ChuDM_2017_SRR8942385_bin.6_k119_7445_24
Type: TC
Location: 26700 - 27542 (-)
Type: TC
Location: 26700 - 27542 (-)
Gene ID: ChuDM_2017_SRR8942385_bin.6_k119_7445_25
Type: TC
Location: 27642 - 28988 (-)
Type: TC
Location: 27642 - 28988 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Flavonifractor
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.