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Cluster: ChuDM_2017_SRR8942385_bin.6_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme ChuDM_2017_SRR8942385_bin.6_k119_5661 ChuDM_2017_SRR8942385_bin.6_k119_5661_45 45671 47158 + CBM50
TC ChuDM_2017_SRR8942385_bin.6_k119_5661 ChuDM_2017_SRR8942385_bin.6_k119_5661_46 47218 47961 - 3.D.1.7.1
TC ChuDM_2017_SRR8942385_bin.6_k119_5661 ChuDM_2017_SRR8942385_bin.6_k119_5661_47 47958 49751 - 3.D.1.5.1
TC ChuDM_2017_SRR8942385_bin.6_k119_5661 ChuDM_2017_SRR8942385_bin.6_k119_5661_48 49744 50220 - 3.D.1.5.1
pfam ChuDM_2017_SRR8942385_bin.6_k119_5661 ChuDM_2017_SRR8942385_bin.6_k119_5661_49 50264 50545 - ThiS
pfam ChuDM_2017_SRR8942385_bin.6_k119_5661 ChuDM_2017_SRR8942385_bin.6_k119_5661_50 50550 52352 - AFOR_C | AFOR_N
TC ChuDM_2017_SRR8942385_bin.6_k119_5661 ChuDM_2017_SRR8942385_bin.6_k119_5661_51 52356 52826 - 5.A.3.11.2
Gene ID: ChuDM_2017_SRR8942385_bin.6_k119_5661_45
Type: CAZyme
Location: 45671 - 47158 (+)
Gene ID: ChuDM_2017_SRR8942385_bin.6_k119_5661_46
Type: TC
Location: 47218 - 47961 (-)
Gene ID: ChuDM_2017_SRR8942385_bin.6_k119_5661_47
Type: TC
Location: 47958 - 49751 (-)
Gene ID: ChuDM_2017_SRR8942385_bin.6_k119_5661_48
Type: TC
Location: 49744 - 50220 (-)
Gene ID: ChuDM_2017_SRR8942385_bin.6_k119_5661_49
Type: pfam
Location: 50264 - 50545 (-)
Gene ID: ChuDM_2017_SRR8942385_bin.6_k119_5661_50
Type: pfam
Location: 50550 - 52352 (-)
Gene ID: ChuDM_2017_SRR8942385_bin.6_k119_5661_51
Type: TC
Location: 52356 - 52826 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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