Cluster: ChuDM_2017_SRR8942385_bin.6_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ChuDM_2017_SRR8942385_bin.6
- CGC Family ID: CGCFAM_00804
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ChuDM_2017_SRR8942385_bin.6_k119_30679 | ChuDM_2017_SRR8942385_bin.6_k119_30679_6 | 4071 | 5726 | - | GH18 |
| STP | ChuDM_2017_SRR8942385_bin.6_k119_30679 | ChuDM_2017_SRR8942385_bin.6_k119_30679_7 | 5984 | 6556 | + | Pribosyltran |
| pfam | ChuDM_2017_SRR8942385_bin.6_k119_30679 | ChuDM_2017_SRR8942385_bin.6_k119_30679_8 | 6899 | 8170 | + | Bmp |
| TC | ChuDM_2017_SRR8942385_bin.6_k119_30679 | ChuDM_2017_SRR8942385_bin.6_k119_30679_9 | 8278 | 9858 | + | 3.A.1.2.12 |
Gene ID: ChuDM_2017_SRR8942385_bin.6_k119_30679_6
Type: CAZyme
Location: 4071 - 5726 (-)
Type: CAZyme
Location: 4071 - 5726 (-)
Gene ID: ChuDM_2017_SRR8942385_bin.6_k119_30679_7
Type: STP
Location: 5984 - 6556 (+)
Type: STP
Location: 5984 - 6556 (+)
Gene ID: ChuDM_2017_SRR8942385_bin.6_k119_30679_8
Type: pfam
Location: 6899 - 8170 (+)
Type: pfam
Location: 6899 - 8170 (+)
Gene ID: ChuDM_2017_SRR8942385_bin.6_k119_30679_9
Type: TC
Location: 8278 - 9858 (+)
Type: TC
Location: 8278 - 9858 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Flavonifractor
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.