Cluster: ChuDM_2017_SRR8942385_bin.6_CGC10
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: ChuDM_2017_SRR8942385_bin.6
- CGC Family ID: CGCFAM_05849
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ChuDM_2017_SRR8942385_bin.6_k119_21637 | ChuDM_2017_SRR8942385_bin.6_k119_21637_10 | 10425 | 12200 | - | GH13_9 |
| pfam | ChuDM_2017_SRR8942385_bin.6_k119_21637 | ChuDM_2017_SRR8942385_bin.6_k119_21637_11 | 12341 | 13294 | + | ZnuA |
| TC | ChuDM_2017_SRR8942385_bin.6_k119_21637 | ChuDM_2017_SRR8942385_bin.6_k119_21637_12 | 13291 | 14061 | + | 3.A.1.15.5 |
Gene ID: ChuDM_2017_SRR8942385_bin.6_k119_21637_10
Type: CAZyme
Location: 10425 - 12200 (-)
Type: CAZyme
Location: 10425 - 12200 (-)
Gene ID: ChuDM_2017_SRR8942385_bin.6_k119_21637_11
Type: pfam
Location: 12341 - 13294 (+)
Type: pfam
Location: 12341 - 13294 (+)
Gene ID: ChuDM_2017_SRR8942385_bin.6_k119_21637_12
Type: TC
Location: 13291 - 14061 (+)
Type: TC
Location: 13291 - 14061 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Flavonifractor
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.