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Cluster: ChuDM_2017_SRR8942364_bin.5_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme ChuDM_2017_SRR8942364_bin.5_k119_8620 ChuDM_2017_SRR8942364_bin.5_k119_8620_74 76283 77209 - CE7
TC ChuDM_2017_SRR8942364_bin.5_k119_8620 ChuDM_2017_SRR8942364_bin.5_k119_8620_75 77341 78168 - 3.A.1.5.27
TC ChuDM_2017_SRR8942364_bin.5_k119_8620 ChuDM_2017_SRR8942364_bin.5_k119_8620_76 78169 80184 - 3.A.1.5.25
TC ChuDM_2017_SRR8942364_bin.5_k119_8620 ChuDM_2017_SRR8942364_bin.5_k119_8620_77 80188 81144 - 3.A.1.5.38
TC ChuDM_2017_SRR8942364_bin.5_k119_8620 ChuDM_2017_SRR8942364_bin.5_k119_8620_78 81302 82915 - 3.A.1.5.27
pfam ChuDM_2017_SRR8942364_bin.5_k119_8620 ChuDM_2017_SRR8942364_bin.5_k119_8620_79 83281 85221 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC ChuDM_2017_SRR8942364_bin.5_k119_8620 ChuDM_2017_SRR8942364_bin.5_k119_8620_80 85228 86910 - 2.A.66.4.4
Gene ID: ChuDM_2017_SRR8942364_bin.5_k119_8620_74
Type: CAZyme
Location: 76283 - 77209 (-)
Gene ID: ChuDM_2017_SRR8942364_bin.5_k119_8620_75
Type: TC
Location: 77341 - 78168 (-)
Gene ID: ChuDM_2017_SRR8942364_bin.5_k119_8620_76
Type: TC
Location: 78169 - 80184 (-)
Gene ID: ChuDM_2017_SRR8942364_bin.5_k119_8620_77
Type: TC
Location: 80188 - 81144 (-)
Gene ID: ChuDM_2017_SRR8942364_bin.5_k119_8620_78
Type: TC
Location: 81302 - 82915 (-)
Gene ID: ChuDM_2017_SRR8942364_bin.5_k119_8620_79
Type: pfam
Location: 83281 - 85221 (-)
Gene ID: ChuDM_2017_SRR8942364_bin.5_k119_8620_80
Type: TC
Location: 85228 - 86910 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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