Cluster: ChuDM_2017_SRR8942364_bin.5_CGC15
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ChuDM_2017_SRR8942364_bin.5
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ChuDM_2017_SRR8942364_bin.5_k119_16720 | ChuDM_2017_SRR8942364_bin.5_k119_16720_24 | 33615 | 35021 | + | CE4 |
| STP | ChuDM_2017_SRR8942364_bin.5_k119_16720 | ChuDM_2017_SRR8942364_bin.5_k119_16720_25 | 35350 | 37194 | + | CBS | CBS |
| TC | ChuDM_2017_SRR8942364_bin.5_k119_16720 | ChuDM_2017_SRR8942364_bin.5_k119_16720_26 | 37203 | 38465 | + | 2.A.55.3.6 |
| TC | ChuDM_2017_SRR8942364_bin.5_k119_16720 | ChuDM_2017_SRR8942364_bin.5_k119_16720_27 | 38576 | 40792 | - | 9.B.97.5.1 |
Gene ID: ChuDM_2017_SRR8942364_bin.5_k119_16720_24
Type: CAZyme
Location: 33615 - 35021 (+)
Type: CAZyme
Location: 33615 - 35021 (+)
Gene ID: ChuDM_2017_SRR8942364_bin.5_k119_16720_25
Type: STP
Location: 35350 - 37194 (+)
Type: STP
Location: 35350 - 37194 (+)
Gene ID: ChuDM_2017_SRR8942364_bin.5_k119_16720_26
Type: TC
Location: 37203 - 38465 (+)
Type: TC
Location: 37203 - 38465 (+)
Gene ID: ChuDM_2017_SRR8942364_bin.5_k119_16720_27
Type: TC
Location: 38576 - 40792 (-)
Type: TC
Location: 38576 - 40792 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp905205145
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.