Cluster: ChuDM_2017_SRR8942361_bin.8_CGC7
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: ChuDM_2017_SRR8942361_bin.8
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ChuDM_2017_SRR8942361_bin.8_k119_4873 | ChuDM_2017_SRR8942361_bin.8_k119_4873_25 | 25579 | 26298 | + | 4.B.1.1.2 |
| pfam | ChuDM_2017_SRR8942361_bin.8_k119_4873 | ChuDM_2017_SRR8942361_bin.8_k119_4873_26 | 26387 | 27604 | - | GTP_cyclohydro2 | DHBP_synthase |
| CAZyme | ChuDM_2017_SRR8942361_bin.8_k119_4873 | ChuDM_2017_SRR8942361_bin.8_k119_4873_27 | 27856 | 29259 | - | AA4 |
Gene ID: ChuDM_2017_SRR8942361_bin.8_k119_4873_25
Type: TC
Location: 25579 - 26298 (+)
Type: TC
Location: 25579 - 26298 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.8_k119_4873_26
Type: pfam
Location: 26387 - 27604 (-)
Type: pfam
Location: 26387 - 27604 (-)
Gene ID: ChuDM_2017_SRR8942361_bin.8_k119_4873_27
Type: CAZyme
Location: 27856 - 29259 (-)
Type: CAZyme
Location: 27856 - 29259 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Caecibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.