Cluster: ChuDM_2017_SRR8942361_bin.8_CGC21
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ChuDM_2017_SRR8942361_bin.8
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ChuDM_2017_SRR8942361_bin.8_k119_10726 | ChuDM_2017_SRR8942361_bin.8_k119_10726_10 | 14181 | 15743 | + | 8.A.59.2.1 |
| TF | ChuDM_2017_SRR8942361_bin.8_k119_10726 | ChuDM_2017_SRR8942361_bin.8_k119_10726_11 | 15770 | 17365 | + | HTH_AraC | HTH_AraC |
| pfam | ChuDM_2017_SRR8942361_bin.8_k119_10726 | ChuDM_2017_SRR8942361_bin.8_k119_10726_12 | 17448 | 18167 | + | DUF554 |
| CAZyme | ChuDM_2017_SRR8942361_bin.8_k119_10726 | ChuDM_2017_SRR8942361_bin.8_k119_10726_13 | 18415 | 19824 | + | AA4 |
Gene ID: ChuDM_2017_SRR8942361_bin.8_k119_10726_10
Type: TC
Location: 14181 - 15743 (+)
Type: TC
Location: 14181 - 15743 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.8_k119_10726_11
Type: TF
Location: 15770 - 17365 (+)
Type: TF
Location: 15770 - 17365 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.8_k119_10726_12
Type: pfam
Location: 17448 - 18167 (+)
Type: pfam
Location: 17448 - 18167 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.8_k119_10726_13
Type: CAZyme
Location: 18415 - 19824 (+)
Type: CAZyme
Location: 18415 - 19824 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Caecibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.