Cluster: ChuDM_2017_SRR8942361_bin.8_CGC20
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: ChuDM_2017_SRR8942361_bin.8
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ChuDM_2017_SRR8942361_bin.8_k119_9438 | ChuDM_2017_SRR8942361_bin.8_k119_9438_66 | 83640 | 85100 | - | 2.A.21.8.2 |
| pfam | ChuDM_2017_SRR8942361_bin.8_k119_9438 | ChuDM_2017_SRR8942361_bin.8_k119_9438_67 | 85287 | 85598 | + | DUF6506 |
| pfam | ChuDM_2017_SRR8942361_bin.8_k119_9438 | ChuDM_2017_SRR8942361_bin.8_k119_9438_68 | 85677 | 86960 | - | Lar_N | LarA_C |
| CAZyme | ChuDM_2017_SRR8942361_bin.8_k119_9438 | ChuDM_2017_SRR8942361_bin.8_k119_9438_69 | 87161 | 88582 | - | AA4 |
| TC | ChuDM_2017_SRR8942361_bin.8_k119_9438 | ChuDM_2017_SRR8942361_bin.8_k119_9438_70 | 88659 | 90197 | - | 2.A.14.1.3 |
Gene ID: ChuDM_2017_SRR8942361_bin.8_k119_9438_66
Type: TC
Location: 83640 - 85100 (-)
Type: TC
Location: 83640 - 85100 (-)
Gene ID: ChuDM_2017_SRR8942361_bin.8_k119_9438_67
Type: pfam
Location: 85287 - 85598 (+)
Type: pfam
Location: 85287 - 85598 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.8_k119_9438_68
Type: pfam
Location: 85677 - 86960 (-)
Type: pfam
Location: 85677 - 86960 (-)
Gene ID: ChuDM_2017_SRR8942361_bin.8_k119_9438_69
Type: CAZyme
Location: 87161 - 88582 (-)
Type: CAZyme
Location: 87161 - 88582 (-)
Gene ID: ChuDM_2017_SRR8942361_bin.8_k119_9438_70
Type: TC
Location: 88659 - 90197 (-)
Type: TC
Location: 88659 - 90197 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Caecibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.