Cluster: ChuDM_2017_SRR8942361_bin.8_CGC19
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ChuDM_2017_SRR8942361_bin.8
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ChuDM_2017_SRR8942361_bin.8_k119_9438 | ChuDM_2017_SRR8942361_bin.8_k119_9438_5 | 6875 | 8764 | + | 2.A.114.1.5 |
| NULL(UNKNOWN) | ChuDM_2017_SRR8942361_bin.8_k119_9438 | ChuDM_2017_SRR8942361_bin.8_k119_9438_6 | 8844 | 9752 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | ChuDM_2017_SRR8942361_bin.8_k119_9438 | ChuDM_2017_SRR8942361_bin.8_k119_9438_7 | 10078 | 11484 | - | AA4 |
| TC | ChuDM_2017_SRR8942361_bin.8_k119_9438 | ChuDM_2017_SRR8942361_bin.8_k119_9438_8 | 11562 | 12821 | - | 2.A.1.14.3 |
Gene ID: ChuDM_2017_SRR8942361_bin.8_k119_9438_5
Type: TC
Location: 6875 - 8764 (+)
Type: TC
Location: 6875 - 8764 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.8_k119_9438_6
Type:
Location: 8844 - 9752 (+)
Type:
Location: 8844 - 9752 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.8_k119_9438_7
Type: CAZyme
Location: 10078 - 11484 (-)
Type: CAZyme
Location: 10078 - 11484 (-)
Gene ID: ChuDM_2017_SRR8942361_bin.8_k119_9438_8
Type: TC
Location: 11562 - 12821 (-)
Type: TC
Location: 11562 - 12821 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Caecibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.