Cluster: ChuDM_2017_SRR8942361_bin.8_CGC18
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: ChuDM_2017_SRR8942361_bin.8
- CGC Family ID: CGCFAM_09239
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ChuDM_2017_SRR8942361_bin.8_k119_9117 | ChuDM_2017_SRR8942361_bin.8_k119_9117_11 | 14157 | 15398 | + | 2.A.6.1.8 |
| TC | ChuDM_2017_SRR8942361_bin.8_k119_9117 | ChuDM_2017_SRR8942361_bin.8_k119_9117_12 | 15414 | 18518 | + | 2.A.6.3.1 |
| CAZyme | ChuDM_2017_SRR8942361_bin.8_k119_9117 | ChuDM_2017_SRR8942361_bin.8_k119_9117_13 | 18676 | 19623 | + | GT2 |
| TC | ChuDM_2017_SRR8942361_bin.8_k119_9117 | ChuDM_2017_SRR8942361_bin.8_k119_9117_14 | 19692 | 20435 | - | 3.A.1.5.22 |
| TC | ChuDM_2017_SRR8942361_bin.8_k119_9117 | ChuDM_2017_SRR8942361_bin.8_k119_9117_15 | 20448 | 21206 | - | 3.A.1.5.43 |
| TC | ChuDM_2017_SRR8942361_bin.8_k119_9117 | ChuDM_2017_SRR8942361_bin.8_k119_9117_16 | 21224 | 22771 | - | 3.A.1.5.20 |
| TC | ChuDM_2017_SRR8942361_bin.8_k119_9117 | ChuDM_2017_SRR8942361_bin.8_k119_9117_17 | 22777 | 23592 | - | 3.A.1.5.27 |
| TC | ChuDM_2017_SRR8942361_bin.8_k119_9117 | ChuDM_2017_SRR8942361_bin.8_k119_9117_18 | 23596 | 24534 | - | 3.A.1.5.3 |
Gene ID: ChuDM_2017_SRR8942361_bin.8_k119_9117_11
Type: TC
Location: 14157 - 15398 (+)
Type: TC
Location: 14157 - 15398 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.8_k119_9117_12
Type: TC
Location: 15414 - 18518 (+)
Type: TC
Location: 15414 - 18518 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.8_k119_9117_13
Type: CAZyme
Location: 18676 - 19623 (+)
Type: CAZyme
Location: 18676 - 19623 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.8_k119_9117_14
Type: TC
Location: 19692 - 20435 (-)
Type: TC
Location: 19692 - 20435 (-)
Gene ID: ChuDM_2017_SRR8942361_bin.8_k119_9117_15
Type: TC
Location: 20448 - 21206 (-)
Type: TC
Location: 20448 - 21206 (-)
Gene ID: ChuDM_2017_SRR8942361_bin.8_k119_9117_16
Type: TC
Location: 21224 - 22771 (-)
Type: TC
Location: 21224 - 22771 (-)
Gene ID: ChuDM_2017_SRR8942361_bin.8_k119_9117_17
Type: TC
Location: 22777 - 23592 (-)
Type: TC
Location: 22777 - 23592 (-)
Gene ID: ChuDM_2017_SRR8942361_bin.8_k119_9117_18
Type: TC
Location: 23596 - 24534 (-)
Type: TC
Location: 23596 - 24534 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Caecibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.