Cluster: ChuDM_2017_SRR8942361_bin.8_CGC14
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: ChuDM_2017_SRR8942361_bin.8
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ChuDM_2017_SRR8942361_bin.8_k119_6648 | ChuDM_2017_SRR8942361_bin.8_k119_6648_68 | 65472 | 66248 | - | 2.A.102.3.1 |
| pfam | ChuDM_2017_SRR8942361_bin.8_k119_6648 | ChuDM_2017_SRR8942361_bin.8_k119_6648_69 | 66262 | 67572 | - | Polysacc_deac_2 |
| CAZyme | ChuDM_2017_SRR8942361_bin.8_k119_6648 | ChuDM_2017_SRR8942361_bin.8_k119_6648_70 | 67663 | 68817 | - | GT28 |
| pfam | ChuDM_2017_SRR8942361_bin.8_k119_6648 | ChuDM_2017_SRR8942361_bin.8_k119_6648_71 | 68930 | 69208 | - | Bac_DNA_binding |
| pfam | ChuDM_2017_SRR8942361_bin.8_k119_6648 | ChuDM_2017_SRR8942361_bin.8_k119_6648_72 | 69205 | 70764 | - | TP_methylase | PRA-PH | PRA-PH | MazG | MazG |
| TC | ChuDM_2017_SRR8942361_bin.8_k119_6648 | ChuDM_2017_SRR8942361_bin.8_k119_6648_73 | 70787 | 72337 | - | 2.A.66.2.14 |
Gene ID: ChuDM_2017_SRR8942361_bin.8_k119_6648_68
Type: TC
Location: 65472 - 66248 (-)
Type: TC
Location: 65472 - 66248 (-)
Gene ID: ChuDM_2017_SRR8942361_bin.8_k119_6648_69
Type: pfam
Location: 66262 - 67572 (-)
Type: pfam
Location: 66262 - 67572 (-)
Gene ID: ChuDM_2017_SRR8942361_bin.8_k119_6648_70
Type: CAZyme
Location: 67663 - 68817 (-)
Type: CAZyme
Location: 67663 - 68817 (-)
Gene ID: ChuDM_2017_SRR8942361_bin.8_k119_6648_71
Type: pfam
Location: 68930 - 69208 (-)
Type: pfam
Location: 68930 - 69208 (-)
Gene ID: ChuDM_2017_SRR8942361_bin.8_k119_6648_72
Type: pfam
Location: 69205 - 70764 (-)
Type: pfam
Location: 69205 - 70764 (-)
Gene ID: ChuDM_2017_SRR8942361_bin.8_k119_6648_73
Type: TC
Location: 70787 - 72337 (-)
Type: TC
Location: 70787 - 72337 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Caecibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.