Cluster: ChuDM_2017_SRR8942361_bin.8_CGC11
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: ChuDM_2017_SRR8942361_bin.8
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ChuDM_2017_SRR8942361_bin.8_k119_5421 | ChuDM_2017_SRR8942361_bin.8_k119_5421_9 | 9731 | 10696 | + | 9.B.146.1.6 |
| pfam | ChuDM_2017_SRR8942361_bin.8_k119_5421 | ChuDM_2017_SRR8942361_bin.8_k119_5421_10 | 10745 | 12100 | + | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| CAZyme | ChuDM_2017_SRR8942361_bin.8_k119_5421 | ChuDM_2017_SRR8942361_bin.8_k119_5421_11 | 12135 | 13301 | + | GT28 |
Gene ID: ChuDM_2017_SRR8942361_bin.8_k119_5421_9
Type: TC
Location: 9731 - 10696 (+)
Type: TC
Location: 9731 - 10696 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.8_k119_5421_10
Type: pfam
Location: 10745 - 12100 (+)
Type: pfam
Location: 10745 - 12100 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.8_k119_5421_11
Type: CAZyme
Location: 12135 - 13301 (+)
Type: CAZyme
Location: 12135 - 13301 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Caecibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.