Cluster: ChuDM_2017_SRR8942361_bin.17_CGC27
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: ChuDM_2017_SRR8942361_bin.17
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ChuDM_2017_SRR8942361_bin.17_k119_8550 | ChuDM_2017_SRR8942361_bin.17_k119_8550_127 | 128283 | 129230 | + | 2.A.119.2.2 |
| NULL(UNKNOWN) | ChuDM_2017_SRR8942361_bin.17_k119_8550 | ChuDM_2017_SRR8942361_bin.17_k119_8550_128 | 129276 | 130067 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | ChuDM_2017_SRR8942361_bin.17_k119_8550 | ChuDM_2017_SRR8942361_bin.17_k119_8550_129 | 130283 | 131365 | + | GT2 |
| CAZyme | ChuDM_2017_SRR8942361_bin.17_k119_8550 | ChuDM_2017_SRR8942361_bin.17_k119_8550_130 | 131375 | 132529 | - | GT2 |
| CAZyme | ChuDM_2017_SRR8942361_bin.17_k119_8550 | ChuDM_2017_SRR8942361_bin.17_k119_8550_131 | 132672 | 133667 | + | GT2 |
Gene ID: ChuDM_2017_SRR8942361_bin.17_k119_8550_127
Type: TC
Location: 128283 - 129230 (+)
Type: TC
Location: 128283 - 129230 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.17_k119_8550_128
Type:
Location: 129276 - 130067 (+)
Type:
Location: 129276 - 130067 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.17_k119_8550_129
Type: CAZyme
Location: 130283 - 131365 (+)
Type: CAZyme
Location: 130283 - 131365 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.17_k119_8550_130
Type: CAZyme
Location: 131375 - 132529 (-)
Type: CAZyme
Location: 131375 - 132529 (-)
Gene ID: ChuDM_2017_SRR8942361_bin.17_k119_8550_131
Type: CAZyme
Location: 132672 - 133667 (+)
Type: CAZyme
Location: 132672 - 133667 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Atopobiaceae
Genus
Tractidigestivibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.