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Cluster: ChuDM_2017_SRR8942361_bin.17_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ChuDM_2017_SRR8942361_bin.17_k119_8008 ChuDM_2017_SRR8942361_bin.17_k119_8008_45 39793 40248 + 4.A.2.1.21
TC ChuDM_2017_SRR8942361_bin.17_k119_8008 ChuDM_2017_SRR8942361_bin.17_k119_8008_46 40333 40647 + 4.A.2.1.10
TC ChuDM_2017_SRR8942361_bin.17_k119_8008 ChuDM_2017_SRR8942361_bin.17_k119_8008_47 40688 41749 + 4.A.2.1.10
CAZyme ChuDM_2017_SRR8942361_bin.17_k119_8008 ChuDM_2017_SRR8942361_bin.17_k119_8008_48 41802 44411 + GH38
TC ChuDM_2017_SRR8942361_bin.17_k119_8008 ChuDM_2017_SRR8942361_bin.17_k119_8008_49 44863 45609 + 3.A.11.1.1
TC ChuDM_2017_SRR8942361_bin.17_k119_8008 ChuDM_2017_SRR8942361_bin.17_k119_8008_50 45602 48097 + 3.A.11.1.3
Gene ID: ChuDM_2017_SRR8942361_bin.17_k119_8008_45
Type: TC
Location: 39793 - 40248 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.17_k119_8008_46
Type: TC
Location: 40333 - 40647 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.17_k119_8008_47
Type: TC
Location: 40688 - 41749 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.17_k119_8008_48
Type: CAZyme
Location: 41802 - 44411 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.17_k119_8008_49
Type: TC
Location: 44863 - 45609 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.17_k119_8008_50
Type: TC
Location: 45602 - 48097 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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