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Cluster: ChuDM_2017_SRR8942361_bin.17_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ChuDM_2017_SRR8942361_bin.17_k119_7097 ChuDM_2017_SRR8942361_bin.17_k119_7097_40 37255 38298 + 3.A.1.14.16
TC ChuDM_2017_SRR8942361_bin.17_k119_7097 ChuDM_2017_SRR8942361_bin.17_k119_7097_41 38291 39100 + 3.A.1.14.3
peptidase ChuDM_2017_SRR8942361_bin.17_k119_7097 ChuDM_2017_SRR8942361_bin.17_k119_7097_42 39233 40381 + M20.UPW
TF ChuDM_2017_SRR8942361_bin.17_k119_7097 ChuDM_2017_SRR8942361_bin.17_k119_7097_43 40401 41396 - HTH_AraC | HTH_AraC
TC ChuDM_2017_SRR8942361_bin.17_k119_7097 ChuDM_2017_SRR8942361_bin.17_k119_7097_44 41604 43022 + 4.A.1.2.11
CAZyme ChuDM_2017_SRR8942361_bin.17_k119_7097 ChuDM_2017_SRR8942361_bin.17_k119_7097_45 43159 44580 + GH1
Gene ID: ChuDM_2017_SRR8942361_bin.17_k119_7097_40
Type: TC
Location: 37255 - 38298 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.17_k119_7097_41
Type: TC
Location: 38291 - 39100 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.17_k119_7097_42
Type: peptidase
Location: 39233 - 40381 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.17_k119_7097_43
Type: TF
Location: 40401 - 41396 (-)
Gene ID: ChuDM_2017_SRR8942361_bin.17_k119_7097_44
Type: TC
Location: 41604 - 43022 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.17_k119_7097_45
Type: CAZyme
Location: 43159 - 44580 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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