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Cluster: ChuDM_2017_SRR8942361_bin.17_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ChuDM_2017_SRR8942361_bin.17_k119_7097 ChuDM_2017_SRR8942361_bin.17_k119_7097_17 15317 16654 + 3.A.1.1.45
TC ChuDM_2017_SRR8942361_bin.17_k119_7097 ChuDM_2017_SRR8942361_bin.17_k119_7097_18 16744 17646 + 3.A.1.1.45
TC ChuDM_2017_SRR8942361_bin.17_k119_7097 ChuDM_2017_SRR8942361_bin.17_k119_7097_19 17646 18509 + 3.A.1.1.45
TC ChuDM_2017_SRR8942361_bin.17_k119_7097 ChuDM_2017_SRR8942361_bin.17_k119_7097_20 18665 19873 + 3.A.1.1.20
CAZyme ChuDM_2017_SRR8942361_bin.17_k119_7097 ChuDM_2017_SRR8942361_bin.17_k119_7097_21 20004 21512 + GH77
CAZyme ChuDM_2017_SRR8942361_bin.17_k119_7097 ChuDM_2017_SRR8942361_bin.17_k119_7097_22 21595 23856 + GT35
Gene ID: ChuDM_2017_SRR8942361_bin.17_k119_7097_17
Type: TC
Location: 15317 - 16654 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.17_k119_7097_18
Type: TC
Location: 16744 - 17646 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.17_k119_7097_19
Type: TC
Location: 17646 - 18509 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.17_k119_7097_20
Type: TC
Location: 18665 - 19873 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.17_k119_7097_21
Type: CAZyme
Location: 20004 - 21512 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.17_k119_7097_22
Type: CAZyme
Location: 21595 - 23856 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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