Cluster: ChuDM_2017_SRR8942360_bin.3_CGC9
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: ChuDM_2017_SRR8942360_bin.3
- CGC Family ID: CGCFAM_05275
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ChuDM_2017_SRR8942360_bin.3_k119_9773 | ChuDM_2017_SRR8942360_bin.3_k119_9773_14 | 15678 | 17393 | - | GT2 |
| TC | ChuDM_2017_SRR8942360_bin.3_k119_9773 | ChuDM_2017_SRR8942360_bin.3_k119_9773_15 | 17637 | 18320 | + | 9.B.27.1.1 |
| pfam | ChuDM_2017_SRR8942360_bin.3_k119_9773 | ChuDM_2017_SRR8942360_bin.3_k119_9773_16 | 18323 | 19312 | + | CCG | Fer4_8 | Fer4_17 |
| pfam | ChuDM_2017_SRR8942360_bin.3_k119_9773 | ChuDM_2017_SRR8942360_bin.3_k119_9773_17 | 19303 | 20427 | + | APH |
| TC | ChuDM_2017_SRR8942360_bin.3_k119_9773 | ChuDM_2017_SRR8942360_bin.3_k119_9773_18 | 20473 | 21888 | - | 2.A.22.5.3 |
| STP | ChuDM_2017_SRR8942360_bin.3_k119_9773 | ChuDM_2017_SRR8942360_bin.3_k119_9773_19 | 22287 | 22853 | + | TetR_N |
| NULL(UNKNOWN) | ChuDM_2017_SRR8942360_bin.3_k119_9773 | ChuDM_2017_SRR8942360_bin.3_k119_9773_20 | 22977 | 24029 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | ChuDM_2017_SRR8942360_bin.3_k119_9773 | ChuDM_2017_SRR8942360_bin.3_k119_9773_21 | 24396 | 26219 | + | 2.A.58.2.2 |
| TC | ChuDM_2017_SRR8942360_bin.3_k119_9773 | ChuDM_2017_SRR8942360_bin.3_k119_9773_22 | 26347 | 27366 | + | 9.B.157.1.1 |
Gene ID: ChuDM_2017_SRR8942360_bin.3_k119_9773_14
Type: CAZyme
Location: 15678 - 17393 (-)
Type: CAZyme
Location: 15678 - 17393 (-)
Gene ID: ChuDM_2017_SRR8942360_bin.3_k119_9773_15
Type: TC
Location: 17637 - 18320 (+)
Type: TC
Location: 17637 - 18320 (+)
Gene ID: ChuDM_2017_SRR8942360_bin.3_k119_9773_16
Type: pfam
Location: 18323 - 19312 (+)
Type: pfam
Location: 18323 - 19312 (+)
Gene ID: ChuDM_2017_SRR8942360_bin.3_k119_9773_17
Type: pfam
Location: 19303 - 20427 (+)
Type: pfam
Location: 19303 - 20427 (+)
Gene ID: ChuDM_2017_SRR8942360_bin.3_k119_9773_18
Type: TC
Location: 20473 - 21888 (-)
Type: TC
Location: 20473 - 21888 (-)
Gene ID: ChuDM_2017_SRR8942360_bin.3_k119_9773_19
Type: STP
Location: 22287 - 22853 (+)
Type: STP
Location: 22287 - 22853 (+)
Gene ID: ChuDM_2017_SRR8942360_bin.3_k119_9773_20
Type:
Location: 22977 - 24029 (+)
Type:
Location: 22977 - 24029 (+)
Gene ID: ChuDM_2017_SRR8942360_bin.3_k119_9773_21
Type: TC
Location: 24396 - 26219 (+)
Type: TC
Location: 24396 - 26219 (+)
Gene ID: ChuDM_2017_SRR8942360_bin.3_k119_9773_22
Type: TC
Location: 26347 - 27366 (+)
Type: TC
Location: 26347 - 27366 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Anaerovoracaceae
Genus
Eubacterium_T
Species
Eubacterium_T sp905214225
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.