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Cluster: ChuDM_2017_SRR8942360_bin.3_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme ChuDM_2017_SRR8942360_bin.3_k119_9248 ChuDM_2017_SRR8942360_bin.3_k119_9248_17 10937 12283 + GH13_20
pfam ChuDM_2017_SRR8942360_bin.3_k119_9248 ChuDM_2017_SRR8942360_bin.3_k119_9248_18 12479 13630 + Aldo_ket_red | Fer4_9 | Fer4_17
sulfatase ChuDM_2017_SRR8942360_bin.3_k119_9248 ChuDM_2017_SRR8942360_bin.3_k119_9248_19 14584 16164 + S1_2
TC ChuDM_2017_SRR8942360_bin.3_k119_9248 ChuDM_2017_SRR8942360_bin.3_k119_9248_20 16490 17371 + 9.B.34.1.2
pfam ChuDM_2017_SRR8942360_bin.3_k119_9248 ChuDM_2017_SRR8942360_bin.3_k119_9248_21 17891 18820 + DUF1848
TC ChuDM_2017_SRR8942360_bin.3_k119_9248 ChuDM_2017_SRR8942360_bin.3_k119_9248_22 19662 20366 + 3.A.1.122.7
Gene ID: ChuDM_2017_SRR8942360_bin.3_k119_9248_17
Type: CAZyme
Location: 10937 - 12283 (+)
Gene ID: ChuDM_2017_SRR8942360_bin.3_k119_9248_18
Type: pfam
Location: 12479 - 13630 (+)
Gene ID: ChuDM_2017_SRR8942360_bin.3_k119_9248_19
Type: sulfatase
Location: 14584 - 16164 (+)
Gene ID: ChuDM_2017_SRR8942360_bin.3_k119_9248_20
Type: TC
Location: 16490 - 17371 (+)
Gene ID: ChuDM_2017_SRR8942360_bin.3_k119_9248_21
Type: pfam
Location: 17891 - 18820 (+)
Gene ID: ChuDM_2017_SRR8942360_bin.3_k119_9248_22
Type: TC
Location: 19662 - 20366 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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