dbCAN HGM

Cluster: ChuDM_2017_SRR8942345_bin.6_CGC4

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	ChuDM_2017_SRR8942345_bin.6_k119_13866	ChuDM_2017_SRR8942345_bin.6_k119_13866_6	4114	5766	+	9.B.174.1.1
pfam	ChuDM_2017_SRR8942345_bin.6_k119_13866	ChuDM_2017_SRR8942345_bin.6_k119_13866_7	5763	6653	+	GTP_EFTU \| MMR_HSR1 \| FeoB_N \| KH_2 \| PduV-EutP
pfam	ChuDM_2017_SRR8942345_bin.6_k119_13866	ChuDM_2017_SRR8942345_bin.6_k119_13866_8	6673	7983	+	GTP_EFTU \| GTP_EFTU \| MMR_HSR1 \| MMR_HSR1 \| FeoB_N \| FeoB_N \| AIG1 \| KH_dom-like
CAZyme	ChuDM_2017_SRR8942345_bin.6_k119_13866	ChuDM_2017_SRR8942345_bin.6_k119_13866_9	8097	9443	-	GH57
CAZyme	ChuDM_2017_SRR8942345_bin.6_k119_13866	ChuDM_2017_SRR8942345_bin.6_k119_13866_10	9462	10712	-	GT4
CAZyme	ChuDM_2017_SRR8942345_bin.6_k119_13866	ChuDM_2017_SRR8942345_bin.6_k119_13866_11	10721	12682	-	GH133

Gene ID: ChuDM_2017_SRR8942345_bin.6_k119_13866_6
Type: TC
Location: 4114 - 5766 (+)

Gene ID: ChuDM_2017_SRR8942345_bin.6_k119_13866_7
Type: pfam
Location: 5763 - 6653 (+)

Gene ID: ChuDM_2017_SRR8942345_bin.6_k119_13866_8
Type: pfam
Location: 6673 - 7983 (+)

Gene ID: ChuDM_2017_SRR8942345_bin.6_k119_13866_9
Type: CAZyme
Location: 8097 - 9443 (-)

Gene ID: ChuDM_2017_SRR8942345_bin.6_k119_13866_10
Type: CAZyme
Location: 9462 - 10712 (-)

Gene ID: ChuDM_2017_SRR8942345_bin.6_k119_13866_11
Type: CAZyme
Location: 10721 - 12682 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.