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Cluster: CasaburiG_2019_SRR6277111_bin.7_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC CasaburiG_2019_SRR6277111_bin.7_k141_5431 CasaburiG_2019_SRR6277111_bin.7_k141_5431_6 6878 7708 - 3.A.1.132.3
pfam CasaburiG_2019_SRR6277111_bin.7_k141_5431 CasaburiG_2019_SRR6277111_bin.7_k141_5431_7 7968 10847 + UvrA_DNA-bind | UvrA_inter
pfam CasaburiG_2019_SRR6277111_bin.7_k141_5431 CasaburiG_2019_SRR6277111_bin.7_k141_5431_8 10981 11481 + tRNA_edit
TC CasaburiG_2019_SRR6277111_bin.7_k141_5431 CasaburiG_2019_SRR6277111_bin.7_k141_5431_9 11485 13788 + 2.A.66.4.4
pfam CasaburiG_2019_SRR6277111_bin.7_k141_5431 CasaburiG_2019_SRR6277111_bin.7_k141_5431_10 13795 15735 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC CasaburiG_2019_SRR6277111_bin.7_k141_5431 CasaburiG_2019_SRR6277111_bin.7_k141_5431_11 16101 17714 + 3.A.1.5.27
TC CasaburiG_2019_SRR6277111_bin.7_k141_5431 CasaburiG_2019_SRR6277111_bin.7_k141_5431_12 17870 18826 + 3.A.1.5.38
TC CasaburiG_2019_SRR6277111_bin.7_k141_5431 CasaburiG_2019_SRR6277111_bin.7_k141_5431_13 18830 20845 + 3.A.1.5.25
TC CasaburiG_2019_SRR6277111_bin.7_k141_5431 CasaburiG_2019_SRR6277111_bin.7_k141_5431_14 20846 21673 + 3.A.1.5.27
CAZyme CasaburiG_2019_SRR6277111_bin.7_k141_5431 CasaburiG_2019_SRR6277111_bin.7_k141_5431_15 21805 22731 + CE7
Gene ID: CasaburiG_2019_SRR6277111_bin.7_k141_5431_6
Type: TC
Location: 6878 - 7708 (-)
Gene ID: CasaburiG_2019_SRR6277111_bin.7_k141_5431_7
Type: pfam
Location: 7968 - 10847 (+)
Gene ID: CasaburiG_2019_SRR6277111_bin.7_k141_5431_8
Type: pfam
Location: 10981 - 11481 (+)
Gene ID: CasaburiG_2019_SRR6277111_bin.7_k141_5431_9
Type: TC
Location: 11485 - 13788 (+)
Gene ID: CasaburiG_2019_SRR6277111_bin.7_k141_5431_10
Type: pfam
Location: 13795 - 15735 (+)
Gene ID: CasaburiG_2019_SRR6277111_bin.7_k141_5431_11
Type: TC
Location: 16101 - 17714 (+)
Gene ID: CasaburiG_2019_SRR6277111_bin.7_k141_5431_12
Type: TC
Location: 17870 - 18826 (+)
Gene ID: CasaburiG_2019_SRR6277111_bin.7_k141_5431_13
Type: TC
Location: 18830 - 20845 (+)
Gene ID: CasaburiG_2019_SRR6277111_bin.7_k141_5431_14
Type: TC
Location: 20846 - 21673 (+)
Gene ID: CasaburiG_2019_SRR6277111_bin.7_k141_5431_15
Type: CAZyme
Location: 21805 - 22731 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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