dbCAN Logo

Cluster: CasaburiG_2019_SRR6277111_bin.7_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC CasaburiG_2019_SRR6277111_bin.7_k141_1967 CasaburiG_2019_SRR6277111_bin.7_k141_1967_7 6964 7437 + 4.A.6.1.18
TC CasaburiG_2019_SRR6277111_bin.7_k141_1967 CasaburiG_2019_SRR6277111_bin.7_k141_1967_8 7447 8232 + 4.A.6.1.13
TC CasaburiG_2019_SRR6277111_bin.7_k141_1967 CasaburiG_2019_SRR6277111_bin.7_k141_1967_9 8235 9068 + 4.A.6.1.13
pfam CasaburiG_2019_SRR6277111_bin.7_k141_1967 CasaburiG_2019_SRR6277111_bin.7_k141_1967_10 9095 9493 + EIIA-man
CAZyme CasaburiG_2019_SRR6277111_bin.7_k141_1967 CasaburiG_2019_SRR6277111_bin.7_k141_1967_11 9506 10630 + GH172
Gene ID: CasaburiG_2019_SRR6277111_bin.7_k141_1967_7
Type: TC
Location: 6964 - 7437 (+)
Gene ID: CasaburiG_2019_SRR6277111_bin.7_k141_1967_8
Type: TC
Location: 7447 - 8232 (+)
Gene ID: CasaburiG_2019_SRR6277111_bin.7_k141_1967_9
Type: TC
Location: 8235 - 9068 (+)
Gene ID: CasaburiG_2019_SRR6277111_bin.7_k141_1967_10
Type: pfam
Location: 9095 - 9493 (+)
Gene ID: CasaburiG_2019_SRR6277111_bin.7_k141_1967_11
Type: CAZyme
Location: 9506 - 10630 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
CasaburiG_2019_SRR6277111_bin.7_k141_1967_7 vegan > omnivore 1.03720 0.00000

🧭 Explore Read Mapping of CGC

← Back to Cluster List