Cluster: CasaburiG_2019_SRR6277111_bin.7_CGC18
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CasaburiG_2019_SRR6277111_bin.7
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | CasaburiG_2019_SRR6277111_bin.7_k141_22332 | CasaburiG_2019_SRR6277111_bin.7_k141_22332_338 | 433678 | 436686 | + | GH2 |
| NULL(UNKNOWN) | CasaburiG_2019_SRR6277111_bin.7_k141_22332 | CasaburiG_2019_SRR6277111_bin.7_k141_22332_339 | 436690 | 437145 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | CasaburiG_2019_SRR6277111_bin.7_k141_22332 | CasaburiG_2019_SRR6277111_bin.7_k141_22332_340 | 437299 | 438762 | + | 2.A.3.7.4 |
| STP | CasaburiG_2019_SRR6277111_bin.7_k141_22332 | CasaburiG_2019_SRR6277111_bin.7_k141_22332_341 | 439185 | 439433 | + | PTS-HPr |
| STP | CasaburiG_2019_SRR6277111_bin.7_k141_22332 | CasaburiG_2019_SRR6277111_bin.7_k141_22332_342 | 439622 | 439864 | + | FeoA |
| TC | CasaburiG_2019_SRR6277111_bin.7_k141_22332 | CasaburiG_2019_SRR6277111_bin.7_k141_22332_343 | 439904 | 440125 | + | 9.A.8.1.6 |
| TC | CasaburiG_2019_SRR6277111_bin.7_k141_22332 | CasaburiG_2019_SRR6277111_bin.7_k141_22332_344 | 440248 | 442575 | + | 9.A.8.1.6 |
Gene ID: CasaburiG_2019_SRR6277111_bin.7_k141_22332_338
Type: CAZyme
Location: 433678 - 436686 (+)
Type: CAZyme
Location: 433678 - 436686 (+)
Gene ID: CasaburiG_2019_SRR6277111_bin.7_k141_22332_339
Type:
Location: 436690 - 437145 (+)
Type:
Location: 436690 - 437145 (+)
Gene ID: CasaburiG_2019_SRR6277111_bin.7_k141_22332_340
Type: TC
Location: 437299 - 438762 (+)
Type: TC
Location: 437299 - 438762 (+)
Gene ID: CasaburiG_2019_SRR6277111_bin.7_k141_22332_341
Type: STP
Location: 439185 - 439433 (+)
Type: STP
Location: 439185 - 439433 (+)
Gene ID: CasaburiG_2019_SRR6277111_bin.7_k141_22332_342
Type: STP
Location: 439622 - 439864 (+)
Type: STP
Location: 439622 - 439864 (+)
Gene ID: CasaburiG_2019_SRR6277111_bin.7_k141_22332_343
Type: TC
Location: 439904 - 440125 (+)
Type: TC
Location: 439904 - 440125 (+)
Gene ID: CasaburiG_2019_SRR6277111_bin.7_k141_22332_344
Type: TC
Location: 440248 - 442575 (+)
Type: TC
Location: 440248 - 442575 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp905215095
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.