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Cluster: CasaburiG_2019_SRR6277111_bin.7_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC CasaburiG_2019_SRR6277111_bin.7_k141_1095 CasaburiG_2019_SRR6277111_bin.7_k141_1095_1 75 644 - 4.A.3.1.1
CAZyme CasaburiG_2019_SRR6277111_bin.7_k141_1095 CasaburiG_2019_SRR6277111_bin.7_k141_1095_2 821 2263 - GH1
TF CasaburiG_2019_SRR6277111_bin.7_k141_1095 CasaburiG_2019_SRR6277111_bin.7_k141_1095_3 2605 3642 + LacI
CAZyme CasaburiG_2019_SRR6277111_bin.7_k141_1095 CasaburiG_2019_SRR6277111_bin.7_k141_1095_4 3910 5349 - GH1
TC CasaburiG_2019_SRR6277111_bin.7_k141_1095 CasaburiG_2019_SRR6277111_bin.7_k141_1095_5 5416 7182 - 4.A.3.1.1
TF CasaburiG_2019_SRR6277111_bin.7_k141_1095 CasaburiG_2019_SRR6277111_bin.7_k141_1095_6 7540 8544 + LacI
TC CasaburiG_2019_SRR6277111_bin.7_k141_1095 CasaburiG_2019_SRR6277111_bin.7_k141_1095_7 8759 9097 + 4.A.3.1.2
Gene ID: CasaburiG_2019_SRR6277111_bin.7_k141_1095_1
Type: TC
Location: 75 - 644 (-)
Gene ID: CasaburiG_2019_SRR6277111_bin.7_k141_1095_2
Type: CAZyme
Location: 821 - 2263 (-)
Gene ID: CasaburiG_2019_SRR6277111_bin.7_k141_1095_3
Type: TF
Location: 2605 - 3642 (+)
Gene ID: CasaburiG_2019_SRR6277111_bin.7_k141_1095_4
Type: CAZyme
Location: 3910 - 5349 (-)
Gene ID: CasaburiG_2019_SRR6277111_bin.7_k141_1095_5
Type: TC
Location: 5416 - 7182 (-)
Gene ID: CasaburiG_2019_SRR6277111_bin.7_k141_1095_6
Type: TF
Location: 7540 - 8544 (+)
Gene ID: CasaburiG_2019_SRR6277111_bin.7_k141_1095_7
Type: TC
Location: 8759 - 9097 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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