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Cluster: CGMR100858_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_9151 k141_9151_9 8662 8970 + 4.A.3.2.4
TC k141_9151 k141_9151_10 9062 9397 + 4.A.3.2.8
CAZyme k141_9151 k141_9151_11 9401 10843 + GH1
CAZyme k141_9151 k141_9151_12 10876 12333 + GH1
TF k141_9151 k141_9151_13 12485 13258 + HTH_6
TC k141_9151 k141_9151_14 13401 14705 + 4.A.3.2.2
CAZyme k141_9151 k141_9151_15 14737 15822 + GH170
pfam k141_9151 k141_9151_16 15877 17040 + Acetyltransf_9 | SCP2_2 | Acetyltransf_17
NULL(UNKNOWN) k141_9151 k141_9151_17 17276 19825 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_9151 k141_9151_18 20020 21147 + 9.B.34.1.4
TC k141_9151 k141_9151_19 21276 22400 + 9.B.34.1.4
Gene ID: k141_9151_9
Type: TC
Location: 8662 - 8970 (+)
Gene ID: k141_9151_10
Type: TC
Location: 9062 - 9397 (+)
Gene ID: k141_9151_11
Type: CAZyme
Location: 9401 - 10843 (+)
Gene ID: k141_9151_12
Type: CAZyme
Location: 10876 - 12333 (+)
Gene ID: k141_9151_13
Type: TF
Location: 12485 - 13258 (+)
Gene ID: k141_9151_14
Type: TC
Location: 13401 - 14705 (+)
Gene ID: k141_9151_15
Type: CAZyme
Location: 14737 - 15822 (+)
Gene ID: k141_9151_16
Type: pfam
Location: 15877 - 17040 (+)
Gene ID: k141_9151_17
Type:
Location: 17276 - 19825 (+)
Gene ID: k141_9151_18
Type: TC
Location: 20020 - 21147 (+)
Gene ID: k141_9151_19
Type: TC
Location: 21276 - 22400 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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