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Cluster: CGMR100858_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_1457 k141_1457_19 18375 19502 + 9.B.34.1.4
pfam k141_1457 k141_1457_20 19716 20255 - Acetyltransf_1 | Acetyltransf_3 | Acetyltransf_4
TF k141_1457 k141_1457_21 20401 20865 + MarR
TC k141_1457 k141_1457_22 20950 22674 + 3.A.1.135.6
TC k141_1457 k141_1457_23 22671 24401 + 3.A.1.135.6
TF k141_1457 k141_1457_24 24743 25444 + GntR
TC k141_1457 k141_1457_25 25463 25945 + 4.A.1.2.5
TC k141_1457 k141_1457_26 25961 27472 + 4.A.1.2.5
CAZyme k141_1457 k141_1457_27 27764 29413 + GH13_29
Gene ID: k141_1457_19
Type: TC
Location: 18375 - 19502 (+)
Gene ID: k141_1457_20
Type: pfam
Location: 19716 - 20255 (-)
Gene ID: k141_1457_21
Type: TF
Location: 20401 - 20865 (+)
Gene ID: k141_1457_22
Type: TC
Location: 20950 - 22674 (+)
Gene ID: k141_1457_23
Type: TC
Location: 22671 - 24401 (+)
Gene ID: k141_1457_24
Type: TF
Location: 24743 - 25444 (+)
Gene ID: k141_1457_25
Type: TC
Location: 25463 - 25945 (+)
Gene ID: k141_1457_26
Type: TC
Location: 25961 - 27472 (+)
Gene ID: k141_1457_27
Type: CAZyme
Location: 27764 - 29413 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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