Cluster: CGMR100448_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate: beta-mannan/fructan
- Genome ID: CGMR100448
- CGC Family ID: CGCFAM_00094
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_56986 | k141_56986_3 | 3116 | 5062 | - | 4.A.1.2.12 |
| CAZyme | k141_56986 | k141_56986_4 | 5267 | 6739 | + | GH32 |
| TF | k141_56986 | k141_56986_5 | 6778 | 7734 | + | LacI |
| pfam | k141_56986 | k141_56986_6 | 8144 | 8368 | - | Fic |
| TC | k141_56986 | k141_56986_7 | 8661 | 10625 | - | 2.A.72.1.3 |
Gene ID: k141_56986_3
Type: TC
Location: 3116 - 5062 (-)
Type: TC
Location: 3116 - 5062 (-)
Gene ID: k141_56986_4
Type: CAZyme
Location: 5267 - 6739 (+)
Type: CAZyme
Location: 5267 - 6739 (+)
Gene ID: k141_56986_5
Type: TF
Location: 6778 - 7734 (+)
Type: TF
Location: 6778 - 7734 (+)
Gene ID: k141_56986_6
Type: pfam
Location: 8144 - 8368 (-)
Type: pfam
Location: 8144 - 8368 (-)
Gene ID: k141_56986_7
Type: TC
Location: 8661 - 10625 (-)
Type: TC
Location: 8661 - 10625 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Lactococcus_A
Species
Lactococcus_A raffinolactis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.