Cluster: CGMR100448_CGC5
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR100448
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_473845 | k141_473845_112 | 123675 | 124346 | - | 3.A.1.114.1 |
| pfam | k141_473845 | k141_473845_113 | 124353 | 125939 | - | FtsX |
| STP | k141_473845 | k141_473845_114 | 126190 | 127380 | + | Pyr_redox_2 |
| CAZyme | k141_473845 | k141_473845_115 | 127621 | 130011 | - | GT35 |
| CAZyme | k141_473845 | k141_473845_116 | 130137 | 131576 | - | GT5 |
| pfam | k141_473845 | k141_473845_117 | 131573 | 132721 | - | NTP_transferase | Hexapep_GlmU |
| pfam | k141_473845 | k141_473845_118 | 132708 | 133853 | - | NTP_transferase | NTP_transf_3 | Hexapep_GlmU |
| CAZyme | k141_473845 | k141_473845_119 | 133943 | 136144 | - | CBM48 | GH13_9 |
| CAZyme | k141_473845 | k141_473845_120 | 136271 | 138052 | - | GH13_39 |
| pfam | k141_473845 | k141_473845_121 | 138055 | 138999 | - | PMI_typeI_C | PMI_typeI_cat | MPI_cupin_dom |
| TF | k141_473845 | k141_473845_122 | 139166 | 139504 | + | HTH_5 |
| TC | k141_473845 | k141_473845_123 | 139473 | 140369 | + | 2.A.4.1.7 |
Gene ID: k141_473845_112
Type: TC
Location: 123675 - 124346 (-)
Type: TC
Location: 123675 - 124346 (-)
Gene ID: k141_473845_113
Type: pfam
Location: 124353 - 125939 (-)
Type: pfam
Location: 124353 - 125939 (-)
Gene ID: k141_473845_114
Type: STP
Location: 126190 - 127380 (+)
Type: STP
Location: 126190 - 127380 (+)
Gene ID: k141_473845_115
Type: CAZyme
Location: 127621 - 130011 (-)
Type: CAZyme
Location: 127621 - 130011 (-)
Gene ID: k141_473845_116
Type: CAZyme
Location: 130137 - 131576 (-)
Type: CAZyme
Location: 130137 - 131576 (-)
Gene ID: k141_473845_117
Type: pfam
Location: 131573 - 132721 (-)
Type: pfam
Location: 131573 - 132721 (-)
Gene ID: k141_473845_118
Type: pfam
Location: 132708 - 133853 (-)
Type: pfam
Location: 132708 - 133853 (-)
Gene ID: k141_473845_119
Type: CAZyme
Location: 133943 - 136144 (-)
Type: CAZyme
Location: 133943 - 136144 (-)
Gene ID: k141_473845_120
Type: CAZyme
Location: 136271 - 138052 (-)
Type: CAZyme
Location: 136271 - 138052 (-)
Gene ID: k141_473845_121
Type: pfam
Location: 138055 - 138999 (-)
Type: pfam
Location: 138055 - 138999 (-)
Gene ID: k141_473845_122
Type: TF
Location: 139166 - 139504 (+)
Type: TF
Location: 139166 - 139504 (+)
Gene ID: k141_473845_123
Type: TC
Location: 139473 - 140369 (+)
Type: TC
Location: 139473 - 140369 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Lactococcus_A
Species
Lactococcus_A raffinolactis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.