Cluster: CGMR100448_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR100448
- CGC Family ID: CGCFAM_01315
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_473845 | k141_473845_2 | 768 | 1838 | - | GH179 |
| TF | k141_473845 | k141_473845_3 | 1978 | 2844 | - | HTH_AraC | HTH_AraC |
| TC | k141_473845 | k141_473845_4 | 2872 | 3720 | - | 3.A.1.1.45 |
| TC | k141_473845 | k141_473845_5 | 3717 | 4631 | - | 3.A.1.1.45 |
Gene ID: k141_473845_2
Type: CAZyme
Location: 768 - 1838 (-)
Type: CAZyme
Location: 768 - 1838 (-)
Gene ID: k141_473845_3
Type: TF
Location: 1978 - 2844 (-)
Type: TF
Location: 1978 - 2844 (-)
Gene ID: k141_473845_4
Type: TC
Location: 2872 - 3720 (-)
Type: TC
Location: 2872 - 3720 (-)
Gene ID: k141_473845_5
Type: TC
Location: 3717 - 4631 (-)
Type: TC
Location: 3717 - 4631 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Lactococcus_A
Species
Lactococcus_A raffinolactis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.