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Cluster: CGMR100448_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_2174 k141_2174_18 16764 17222 - 9.B.105.1.5
pfam k141_2174 k141_2174_19 17285 19732 - DNA_topoisoIV | DNA_gyraseA_C | DNA_gyraseA_C | DNA_gyraseA_C | DNA_gyraseA_C
TC k141_2174 k141_2174_20 19751 20404 - 2.A.38.4.4
TC k141_2174 k141_2174_21 20447 21781 - 2.A.38.4.1
STP k141_2174 k141_2174_22 21790 23745 - HATPase_c
TC k141_2174 k141_2174_23 24146 26299 - 3.A.7.7.1
pfam k141_2174 k141_2174_24 26565 26756 + DUF6290
pfam k141_2174 k141_2174_25 27081 27944 - ROK
CAZyme k141_2174 k141_2174_26 27950 29374 - GH1
TC k141_2174 k141_2174_27 29589 30284 - 2.A.122.1.4
TC k141_2174 k141_2174_28 30281 30643 - 1.E.14.1.15
Gene ID: k141_2174_18
Type: TC
Location: 16764 - 17222 (-)
Gene ID: k141_2174_19
Type: pfam
Location: 17285 - 19732 (-)
Gene ID: k141_2174_20
Type: TC
Location: 19751 - 20404 (-)
Gene ID: k141_2174_21
Type: TC
Location: 20447 - 21781 (-)
Gene ID: k141_2174_22
Type: STP
Location: 21790 - 23745 (-)
Gene ID: k141_2174_23
Type: TC
Location: 24146 - 26299 (-)
Gene ID: k141_2174_24
Type: pfam
Location: 26565 - 26756 (+)
Gene ID: k141_2174_25
Type: pfam
Location: 27081 - 27944 (-)
Gene ID: k141_2174_26
Type: CAZyme
Location: 27950 - 29374 (-)
Gene ID: k141_2174_27
Type: TC
Location: 29589 - 30284 (-)
Gene ID: k141_2174_28
Type: TC
Location: 30281 - 30643 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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